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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
454 Sequencing (SRP001803)
Anticodon = CCG
HIT:
23 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.165412 (3 seq.)
>WENV170611548
FUWD012346509
[FUWD] metagenome; unknown
295
218
-
Arg
CCG
[ENA]
¢þ
>SRA1017757
SRR035082.192473
454 Sequencing (SRP001803)
294
217
-
Arg
CCG
[SRA]
>SRA1019631
SRR035082.492093
454 Sequencing (SRP001803)
127
204
+
Arg
CCG
[SRA]
Identical group No.177443 (2 seq.)
>SRA1019514
SRR035082.469884
454 Sequencing (SRP001803)
307
233
-
Arg
CCG
[SRA]
>SRA1026491
SRR035085.215917
454 Sequencing (SRP001806)
316
243
-
Arg
CCG
[SRA]
Identical group No.177856 (13 seq.)
>W131162454
AQYX01000172
Atribacterota
Atribacteria bacterium SCGC AAA252-M02 OP9 bacterium SCGC AAA252-M02 [AQYX]
12493
12417
-
Arg
CCG
[ENA]
¡û
>W131193727
ASOX01000018
Atribacterota
Atribacteria bacterium SCGC AB-164-P05 OP9 bacterium SCGC AB-164-P05 [ASOX]
6218
6294
+
Arg
CCG
[ENA]
¡û
>W131193777
ASPA01000072
Atribacterota
Atribacteria bacterium SCGC AAA255-G05 OP9 bacterium SCGC AAA255-G05 [ASPA]
1168
1092
-
Arg
CCG
[ENA]
¡û
>W131203650
ASZL01000025
Atribacterota
Atribacteria bacterium SCGC AB-164-M20 OP9 bacterium SCGC AB-164-M20 [ASZL]
6127
6051
-
Arg
CCG
[ENA]
¡û
>W141139548
AWNT01000012
Atribacterota
Atribacteria bacterium JGI OTU-1 [AWNT]
12493
12417
-
Arg
CCG
[ENA]
¡û
>WENV170018002
BARV01003462
[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
57
133
+
Arg
CCG
[ENA]
¢þ
>WENV170603337
FUWD010302792
[FUWD] metagenome; unknown
114
38
-
Arg
CCG
[ENA]
¢þ
>SRA1019199
SRR035082.418565
454 Sequencing (SRP001803)
321
245
-
Arg
CCG
[SRA]
>SRA1030715
SRR035087.317928
454 Sequencing (SRP001808)
54
130
+
Arg
CCG
[SRA]
>SRA1031025
SRR035087.361312
454 Sequencing (SRP001808)
100
24
-
Arg
CCG
[SRA]
>SRA1036351
SRR035089.500267
454 Sequencing (SRP001810)
205
281
+
Arg
CCG
[SRA]
>SRA1036486
SRR035089.531916
454 Sequencing (SRP001810)
179
103
-
Arg
CCG
[SRA]
>SRA1043566
SRR035092.139114
454 Sequencing (SRP001813)
112
36
-
Arg
CCG
[SRA]
Identical group No.196353 (3 seq.)
>WENV170611687
FUWD012374788
[FUWD] metagenome; unknown
48
121
+
Arg
CCG
[ENA]
¢þ
>SRA1019549
SRR035082.475704
454 Sequencing (SRP001803)
357
430
+
Arg
CCG
[SRA]
>SRA1030968
SRR035087.356170
454 Sequencing (SRP001808)
48
121
+
Arg
CCG
[SRA]
Identical group No.230266 (5 seq.)
>WENV170608134
FUWD010895771
[FUWD] metagenome; unknown
537
463
-
Arg
CCG
[ENA]
¢þ
>SRA1016702
SRR035082.7956
454 Sequencing (SRP001803)
212
138
-
Arg
CCG
[SRA]
>SRA1019579
SRR035082.480860
454 Sequencing (SRP001803)
191
117
-
Arg
CCG
[SRA]
>SRA1044062
SRR035092.216877
454 Sequencing (SRP001813)
148
222
+
Arg
CCG
[SRA]
>SRA1045039
SRR035092.397880
454 Sequencing (SRP001813)
147
221
+
Arg
CCG
[SRA]
Identical group No.274702 (1 seq.)
>SRA1018036
SRR035082.229692
454 Sequencing (SRP001803)
381
308
-
Arg
CCG
[SRA]
Identical group No.274759 (1 seq.)
>SRA1018619
SRR035082.323895
454 Sequencing (SRP001803)
341
265
-
Arg
CCG
[SRA]
Identical group No.282174 (135 seq.)
>C018272
CP000607
Chlorobiota
Chlorobium phaeovibrioides [CP000607]
1162448
1162376
-
Arg
CCG
[Ensembl]
¡û
>WENV170614044
FUWD012824125
[FUWD] metagenome; unknown
12024
12097
+
Arg
CCG
[ENA]
¢þ
>W09103340
AAJD01000001
Chlorobiota
Chlorobium phaeovibrioides DSM 265 [AAJD]
159522
159449
-
Arg
CCG
[ENA]
¡û
>SRA1016908
SRR035082.50899
454 Sequencing (SRP001803)
296
223
-
Arg
CCG
[SRA]
>SRA1019961
SRR035083.30806
454 Sequencing (SRP001804)
201
274
+
Arg
CCG
[SRA]
>SRA1020080
SRR035083.55369
454 Sequencing (SRP001804)
238
165
-
Arg
CCG
[SRA]
>SRA1020130
SRR035083.60883
454 Sequencing (SRP001804)
61
134
+
Arg
CCG
[SRA]
>SRA1020133
SRR035083.61071
454 Sequencing (SRP001804)
138
211
+
Arg
CCG
[SRA]
>SRA1020289
SRR035083.90390
454 Sequencing (SRP001804)
425
498
+
Arg
CCG
[SRA]
>SRA1020301
SRR035083.93011
454 Sequencing (SRP001804)
203
276
+
Arg
CCG
[SRA]
>SRA1020397
SRR035083.108863
454 Sequencing (SRP001804)
373
446
+
Arg
CCG
[SRA]
>SRA1020477
SRR035083.120945
454 Sequencing (SRP001804)
358
431
+
Arg
CCG
[SRA]
>SRA1020527
SRR035083.130659
454 Sequencing (SRP001804)
316
243
-
Arg
CCG
[SRA]
>SRA1020628
SRR035083.142742
454 Sequencing (SRP001804)
318
391
+
Arg
CCG
[SRA]
>SRA1020699
SRR035083.153653
454 Sequencing (SRP001804)
238
311
+
Arg
CCG
[SRA]
>SRA1020851
SRR035083.173092
454 Sequencing (SRP001804)
284
211
-
Arg
CCG
[SRA]
>SRA1020911
SRR035083.183841
454 Sequencing (SRP001804)
284
211
-
Arg
CCG
[SRA]
>SRA1020950
SRR035083.189418
454 Sequencing (SRP001804)
217
290
+
Arg
CCG
[SRA]
>SRA1021010
SRR035083.197302
454 Sequencing (SRP001804)
436
509
+
Arg
CCG
[SRA]
>SRA1021055
SRR035083.204235
454 Sequencing (SRP001804)
319
392
+
Arg
CCG
[SRA]
>SRA1021059
SRR035083.204420
454 Sequencing (SRP001804)
203
276
+
Arg
CCG
[SRA]
>SRA1021083
SRR035083.206128
454 Sequencing (SRP001804)
285
212
-
Arg
CCG
[SRA]
>SRA1021188
SRR035083.221267
454 Sequencing (SRP001804)
205
278
+
Arg
CCG
[SRA]
>SRA1021235
SRR035083.227497
454 Sequencing (SRP001804)
205
278
+
Arg
CCG
[SRA]
>SRA1021313
SRR035083.240447
454 Sequencing (SRP001804)
217
290
+
Arg
CCG
[SRA]
>SRA1021359
SRR035083.249816
454 Sequencing (SRP001804)
324
251
-
Arg
CCG
[SRA]
>SRA1021597
SRR035083.278813
454 Sequencing (SRP001804)
317
244
-
Arg
CCG
[SRA]
>SRA1021613
SRR035083.281562
454 Sequencing (SRP001804)
205
280
+
Arg
CCG
[SRA]
>SRA1021654
SRR035083.287624
454 Sequencing (SRP001804)
255
328
+
Arg
CCG
[SRA]
>SRA1021767
SRR035083.306552
454 Sequencing (SRP001804)
205
278
+
Arg
CCG
[SRA]
>SRA1021791
SRR035083.310429
454 Sequencing (SRP001804)
134
207
+
Arg
CCG
[SRA]
>SRA1021809
SRR035083.312606
454 Sequencing (SRP001804)
217
290
+
Arg
CCG
[SRA]
>SRA1021823
SRR035083.313741
454 Sequencing (SRP001804)
403
476
+
Arg
CCG
[SRA]
>SRA1021856
SRR035083.319123
454 Sequencing (SRP001804)
417
344
-
Arg
CCG
[SRA]
>SRA1021858
SRR035083.319341
454 Sequencing (SRP001804)
390
317
-
Arg
CCG
[SRA]
>SRA1021958
SRR035083.332170
454 Sequencing (SRP001804)
317
244
-
Arg
CCG
[SRA]
>SRA1021994
SRR035083.336030
454 Sequencing (SRP001804)
40
113
+
Arg
CCG
[SRA]
>SRA1022004
SRR035083.338443
454 Sequencing (SRP001804)
256
329
+
Arg
CCG
[SRA]
>SRA1022050
SRR035083.346349
454 Sequencing (SRP001804)
46
119
+
Arg
CCG
[SRA]
>SRA1022070
SRR035083.348780
454 Sequencing (SRP001804)
434
507
+
Arg
CCG
[SRA]
>SRA1022302
SRR035083.385488
454 Sequencing (SRP001804)
59
132
+
Arg
CCG
[SRA]
>SRA1022385
SRR035083.398739
454 Sequencing (SRP001804)
40
113
+
Arg
CCG
[SRA]
>SRA1022403
SRR035083.400853
454 Sequencing (SRP001804)
257
330
+
Arg
CCG
[SRA]
>SRA1022407
SRR035083.401484
454 Sequencing (SRP001804)
255
328
+
Arg
CCG
[SRA]
>SRA1022469
SRR035083.409819
454 Sequencing (SRP001804)
217
290
+
Arg
CCG
[SRA]
>SRA1022505
SRR035083.415392
454 Sequencing (SRP001804)
263
190
-
Arg
CCG
[SRA]
>SRA1022553
SRR035083.423374
454 Sequencing (SRP001804)
255
328
+
Arg
CCG
[SRA]
>SRA1022557
SRR035083.423683
454 Sequencing (SRP001804)
376
303
-
Arg
CCG
[SRA]
>SRA1022598
SRR035083.430373
454 Sequencing (SRP001804)
256
329
+
Arg
CCG
[SRA]
>SRA1022677
SRR035083.440579
454 Sequencing (SRP001804)
213
140
-
Arg
CCG
[SRA]
>SRA1022704
SRR035083.444502
454 Sequencing (SRP001804)
345
272
-
Arg
CCG
[SRA]
>SRA1022762
SRR035083.455799
454 Sequencing (SRP001804)
198
271
+
Arg
CCG
[SRA]
>SRA1022813
SRR035083.465067
454 Sequencing (SRP001804)
372
299
-
Arg
CCG
[SRA]
>SRA1022876
SRR035083.477003
454 Sequencing (SRP001804)
296
223
-
Arg
CCG
[SRA]
>SRA1022893
SRR035083.480252
454 Sequencing (SRP001804)
345
272
-
Arg
CCG
[SRA]
>SRA1022905
SRR035083.483936
454 Sequencing (SRP001804)
134
207
+
Arg
CCG
[SRA]
>SRA1023010
SRR035083.504277
454 Sequencing (SRP001804)
135
208
+
Arg
CCG
[SRA]
>SRA1023068
SRR035083.514397
454 Sequencing (SRP001804)
103
30
-
Arg
CCG
[SRA]
>SRA1032509
SRR035088.31138
454 Sequencing (SRP001809)
61
134
+
Arg
CCG
[SRA]
>SRA1032724
SRR035088.87553
454 Sequencing (SRP001809)
62
135
+
Arg
CCG
[SRA]
>SRA1032770
SRR035088.99672
454 Sequencing (SRP001809)
317
390
+
Arg
CCG
[SRA]
>SRA1033789
SRR035088.355741
454 Sequencing (SRP001809)
158
231
+
Arg
CCG
[SRA]
>SRA1034236
SRR035089.32247
454 Sequencing (SRP001810)
183
256
+
Arg
CCG
[SRA]
>SRA1036151
SRR035089.456956
454 Sequencing (SRP001810)
202
275
+
Arg
CCG
[SRA]
>SRA1036793
SRR035090.6110
454 Sequencing (SRP001811)
167
240
+
Arg
CCG
[SRA]
>SRA1036824
SRR035090.16077
454 Sequencing (SRP001811)
37
110
+
Arg
CCG
[SRA]
>SRA1036826
SRR035090.17080
454 Sequencing (SRP001811)
168
241
+
Arg
CCG
[SRA]
>SRA1036902
SRR035090.35397
454 Sequencing (SRP001811)
171
244
+
Arg
CCG
[SRA]
>SRA1036939
SRR035090.41602
454 Sequencing (SRP001811)
66
139
+
Arg
CCG
[SRA]
>SRA1037144
SRR035090.81767
454 Sequencing (SRP001811)
67
140
+
Arg
CCG
[SRA]
>SRA1037221
SRR035090.95102
454 Sequencing (SRP001811)
270
343
+
Arg
CCG
[SRA]
>SRA1037315
SRR035090.112700
454 Sequencing (SRP001811)
356
283
-
Arg
CCG
[SRA]
>SRA1037330
SRR035090.117293
454 Sequencing (SRP001811)
120
193
+
Arg
CCG
[SRA]
>SRA1037394
SRR035090.127997
454 Sequencing (SRP001811)
68
141
+
Arg
CCG
[SRA]
>SRA1037456
SRR035090.137468
454 Sequencing (SRP001811)
359
432
+
Arg
CCG
[SRA]
>SRA1037675
SRR035090.172947
454 Sequencing (SRP001811)
68
141
+
Arg
CCG
[SRA]
>SRA1037679
SRR035090.173477
454 Sequencing (SRP001811)
115
188
+
Arg
CCG
[SRA]
>SRA1037726
SRR035090.181223
454 Sequencing (SRP001811)
273
200
-
Arg
CCG
[SRA]
>SRA1037779
SRR035090.192485
454 Sequencing (SRP001811)
83
156
+
Arg
CCG
[SRA]
>SRA1037802
SRR035090.198784
454 Sequencing (SRP001811)
96
169
+
Arg
CCG
[SRA]
>SRA1038127
SRR035090.249948
454 Sequencing (SRP001811)
267
194
-
Arg
CCG
[SRA]
>SRA1038297
SRR035090.283613
454 Sequencing (SRP001811)
149
76
-
Arg
CCG
[SRA]
>SRA1038315
SRR035090.285968
454 Sequencing (SRP001811)
44
117
+
Arg
CCG
[SRA]
>SRA1038346
SRR035090.289974
454 Sequencing (SRP001811)
266
193
-
Arg
CCG
[SRA]
>SRA1038353
SRR035090.290636
454 Sequencing (SRP001811)
355
428
+
Arg
CCG
[SRA]
>SRA1038375
SRR035090.293296
454 Sequencing (SRP001811)
221
294
+
Arg
CCG
[SRA]
>SRA1038395
SRR035090.297076
454 Sequencing (SRP001811)
216
289
+
Arg
CCG
[SRA]
>SRA1038426
SRR035090.302379
454 Sequencing (SRP001811)
228
301
+
Arg
CCG
[SRA]
>SRA1038512
SRR035090.318948
454 Sequencing (SRP001811)
309
382
+
Arg
CCG
[SRA]
>SRA1038544
SRR035090.325249
454 Sequencing (SRP001811)
228
301
+
Arg
CCG
[SRA]
>SRA1038624
SRR035090.338776
454 Sequencing (SRP001811)
44
117
+
Arg
CCG
[SRA]
>SRA1038688
SRR035090.350279
454 Sequencing (SRP001811)
267
194
-
Arg
CCG
[SRA]
>SRA1038721
SRR035090.354504
454 Sequencing (SRP001811)
197
270
+
Arg
CCG
[SRA]
>SRA1038840
SRR035090.377478
454 Sequencing (SRP001811)
182
109
-
Arg
CCG
[SRA]
>SRA1038875
SRR035090.385726
454 Sequencing (SRP001811)
253
326
+
Arg
CCG
[SRA]
>SRA1039029
SRR035090.410699
454 Sequencing (SRP001811)
355
282
-
Arg
CCG
[SRA]
>SRA1039047
SRR035090.416215
454 Sequencing (SRP001811)
355
428
+
Arg
CCG
[SRA]
>SRA1039062
SRR035090.417471
454 Sequencing (SRP001811)
404
477
+
Arg
CCG
[SRA]
>SRA1039076
SRR035090.420535
454 Sequencing (SRP001811)
95
168
+
Arg
CCG
[SRA]
>SRA1039085
SRR035090.421737
454 Sequencing (SRP001811)
30
103
+
Arg
CCG
[SRA]
>SRA1039091
SRR035090.423292
454 Sequencing (SRP001811)
309
382
+
Arg
CCG
[SRA]
>SRA1039126
SRR035090.429173
454 Sequencing (SRP001811)
311
384
+
Arg
CCG
[SRA]
>SRA1039155
SRR035090.433214
454 Sequencing (SRP001811)
31
104
+
Arg
CCG
[SRA]
>SRA1039182
SRR035090.438183
454 Sequencing (SRP001811)
98
171
+
Arg
CCG
[SRA]
>SRA1039189
SRR035090.439489
454 Sequencing (SRP001811)
256
329
+
Arg
CCG
[SRA]
>SRA1039201
SRR035090.442685
454 Sequencing (SRP001811)
265
192
-
Arg
CCG
[SRA]
>SRA1039251
SRR035090.452760
454 Sequencing (SRP001811)
199
272
+
Arg
CCG
[SRA]
>SRA1039252
SRR035090.452853
454 Sequencing (SRP001811)
115
188
+
Arg
CCG
[SRA]
>SRA1039295
SRR035090.460955
454 Sequencing (SRP001811)
44
117
+
Arg
CCG
[SRA]
>SRA1039310
SRR035090.464945
454 Sequencing (SRP001811)
44
117
+
Arg
CCG
[SRA]
>SRA1039346
SRR035090.473552
454 Sequencing (SRP001811)
337
264
-
Arg
CCG
[SRA]
>SRA1039364
SRR035090.478995
454 Sequencing (SRP001811)
132
205
+
Arg
CCG
[SRA]
>SRA1039463
SRR035090.496980
454 Sequencing (SRP001811)
126
199
+
Arg
CCG
[SRA]
>SRA1039552
SRR035090.515169
454 Sequencing (SRP001811)
321
248
-
Arg
CCG
[SRA]
>SRA1039652
SRR035090.537238
454 Sequencing (SRP001811)
323
250
-
Arg
CCG
[SRA]
>SRA1039688
SRR035090.546000
454 Sequencing (SRP001811)
351
278
-
Arg
CCG
[SRA]
>SRA1039710
SRR035090.551336
454 Sequencing (SRP001811)
116
189
+
Arg
CCG
[SRA]
>SRA1039714
SRR035090.552416
454 Sequencing (SRP001811)
208
281
+
Arg
CCG
[SRA]
>SRA1039729
SRR035090.555073
454 Sequencing (SRP001811)
97
170
+
Arg
CCG
[SRA]
>SRA1039866
SRR035090.587255
454 Sequencing (SRP001811)
166
93
-
Arg
CCG
[SRA]
>SRA1039887
SRR035090.592906
454 Sequencing (SRP001811)
86
159
+
Arg
CCG
[SRA]
>SRA1039912
SRR035090.600864
454 Sequencing (SRP001811)
62
135
+
Arg
CCG
[SRA]
>SRA1039964
SRR035090.615230
454 Sequencing (SRP001811)
44
117
+
Arg
CCG
[SRA]
>SRA1039974
SRR035091.5765
454 Sequencing (SRP001812)
166
93
-
Arg
CCG
[SRA]
>SRA1040512
SRR035091.107739
454 Sequencing (SRP001812)
102
175
+
Arg
CCG
[SRA]
>SRA1041804
SRR035091.297277
454 Sequencing (SRP001812)
72
145
+
Arg
CCG
[SRA]
>SRA1053496
SRR035098.418373
454 Sequencing (SRP001819)
193
266
+
Arg
CCG
[SRA]
>SRA1054103
SRR035099.57663
454 Sequencing (SRP001820)
284
211
-
Arg
CCG
[SRA]
>SRA1054250
SRR035099.92469
454 Sequencing (SRP001820)
104
31
-
Arg
CCG
[SRA]
>SRA1054385
SRR035099.120700
454 Sequencing (SRP001820)
243
170
-
Arg
CCG
[SRA]
>SRA1054390
SRR035099.121407
454 Sequencing (SRP001820)
196
269
+
Arg
CCG
[SRA]
>SRA1054440
SRR035099.133547
454 Sequencing (SRP001820)
329
256
-
Arg
CCG
[SRA]
>SRA1054601
SRR035099.171058
454 Sequencing (SRP001820)
111
184
+
Arg
CCG
[SRA]
>SRA1054634
SRR035099.180282
454 Sequencing (SRP001820)
381
308
-
Arg
CCG
[SRA]
>SRA1054715
SRR035099.194092
454 Sequencing (SRP001820)
67
140
+
Arg
CCG
[SRA]
Identical group No.316598 (38 seq.)
>W1711629771
MPPI01000004
Cyanobacteriota
Phormidesmis priestleyi ULC007 [MPPI]
53954
53882
-
Arg
CCG
[ENA]
¡û
>W1711666582
MRCC01000005
Cyanobacteriota
Chroogloeocystis siderophila 5.2 s.c.1 [MRCC]
158920
158848
-
Arg
CCG
[ENA]
¡û
>W1711979737
NDGV01000008
Cyanobacteriota
cyanobacterium TDX16 [NDGV]
37375
37303
-
Arg
CCG
[ENA]
¡û
>W131063226
ANKN01000100
Cyanobacteriota
Prochlorothrix hollandica PCC 9006 [ANKN]
53058
53130
+
Arg
CCG
[ENA]
¡û
>W131063292
ANKO01000148
Cyanobacteriota
Oscillatoria sp. PCC 10802 [ANKO]
114756
114828
+
Arg
CCG
[ENA]
¡û
>C021097
AP008231
Cyanobacteriota
Synechococcus elongatus PCC 6301 [AP008231]
1998719
1998647
-
Arg
CCG
[Ensembl]
¡û
>C021140
CP000100
Cyanobacteriota
Synechococcus elongatus PCC 7942 = FACHB-805 [CP000100]
2318309
2318381
+
Arg
CCG
[Ensembl]
¡û
>w021640
AAVU01000038
Cyanobacteriota
Lyngbya sp. PCC 8106 [AAVU]
31964
31887
-
Arg
CCG
[ENA]
¡û
>W141022508
AJTX01000497
Cyanobacteriota
Prochlorothrix hollandica PCC 9006 [AJTX]
902
830
-
Arg
CCG
[ENA]
¡û
>W141038468
ALVV02000060
Cyanobacteriota
Leptolyngbya sp. PCC 6406 [ALVV]
171990
171918
-
Arg
CCG
[ENA]
¡û
>W141091944
AUZM01000020
Cyanobacteriota
Lyngbya aestuarii BL J [AUZM]
40832
40906
+
Arg
CCG
[ENA]
¡û
>W08011546
ABVJ01000012
Cyanobacteriota
Cyanothece sp. PCC 7425 [ABVJ]
33875
33800
-
Arg
CCG
[ENA]
¡û
>W141240112
CAFN01000006
Cyanobacteriota
Limnospira indica PCC 8005 [CAFN]
533
461
-
Arg
CCG
[ENA]
¡û
>C08000550
CP000828
Cyanobacteriota
Acaryochloris marina MBIC11017 [CP000828]
5884305
5884378
+
Arg
CCG
[Ensembl]
¡û
>ENV08002238
ABPP01005283
microbial mat metagenome; Guerrero Negro Hypersaline Mat 01; altitude 310m AMSL; sample depth 1m below water level, 0-1mm depth into the mat
637
565
-
Arg
CCG
[ENA]
¡û
>WENV170597803
FUWD010015051
[FUWD] metagenome; unknown
90
163
+
Arg
CCG
[ENA]
¢þ
>C181169669
CP028914
Cyanobacteriota
Arthrospira sp. TJSD092 [CP028914]
4434310
4434382
+
Arg
CCG
-
¡û
>C191099569
CP033061
Cyanobacteriota
Synechococcus elongatus UTEX 3055 [CP033061]
1546722
1546650
-
Arg
CCG
-
¡û
>W141701079
JMKF01000035
Cyanobacteriota
[Leptolyngbya] sp. JSC-1 JSC-1 [JMKF]
79212
79140
-
Arg
CCG
[ENA]
¡û
>W09101105
AADZ01000001
Cyanobacteriota
Synechococcus elongatus PCC 7942 [AADZ]
1606931
1607003
+
Arg
CCG
[ENA]
¡û
>C09103575
CP001344
Cyanobacteriota
Cyanothece sp. PCC 7425 [CP001344]
1300203
1300278
+
Arg
CCG
[Ensembl]
¡û
>W1910812546
MVDI01000002
Cyanobacteriota
Chroococcidiopsis sp. TS-821 [MVDI]
519254
519182
-
Arg
CCG
[ENA]
¡û
>W1910976651
NKFP01000006
Cyanobacteriota
Leptolyngbya ohadii IS1 [NKFP]
139604
139676
+
Arg
CCG
[ENA]
¡û
>W1810185591
PKGD01000488
Cyanobacteriota
Arthrospira sp. O9.13F [PKGD]
2498
2570
+
Arg
CCG
[ENA]
¡û
>W1810296717
PTJN01000088
Cyanobacteriota
Gloeocapsopsis dulcis AAB1 [PTJN]
7111
7039
-
Arg
CCG
[ENA]
¡û
>W1810366199
PVWD01000148
Cyanobacteriota
filamentous cyanobacterium CCP2 [PVWD]
11067
10993
-
Arg
CCG
[ENA]
¡û
>W1810366231
PVWE01000135
Cyanobacteriota
filamentous cyanobacterium CCP1 [PVWE]
2569
2495
-
Arg
CCG
[ENA]
¡û
>W1810366244
PVWG01000003
Cyanobacteriota
Phormidesmis priestleyi ULC007 [PVWG]
122897
122825
-
Arg
CCG
[ENA]
¡û
>SRA1017758
SRR035082.192532
454 Sequencing (SRP001803)
291
219
-
Arg
CCG
[SRA]
>C151009173
CP006471
Cyanobacteriota
Synechococcus elongatus UTEX 2973 [CP006471]
946169
946097
-
Arg
CCG
[Ensembl]
¡û
>W1511108026
JJML01000063
Cyanobacteriota
Neosynechococcus sphagnicola sy1 CAUP A 1101 [JJML]
17911
17986
+
Arg
CCG
[ENA]
¡û
>W1511585662
LAYT01000116
Cyanobacteriota
Arthrospira sp. TJSD091 [LAYT]
19669
19741
+
Arg
CCG
[ENA]
¡û
>W11160134
AFEJ01000296
Cyanobacteriota
Acaryochloris sp. CCMEE 5410 [AFEJ]
2504
2432
-
Arg
CCG
[ENA]
¡û
>C161002771
AP017367
Cyanobacteriota
Leptolyngbya sp. O-77 [AP017367]
2288291
2288363
+
Arg
CCG
[Ensembl]
¡û
>C161049415
CP013008
Cyanobacteriota
Arthrospira platensis YZ [CP013008]
2316281
2316209
-
Arg
CCG
-
¡û
>C161103173
FO818640
Cyanobacteriota
Limnospira indica PCC 8005 [FO818640]
1288207
1288135
-
Arg
CCG
-
¡û
>C131004402
CP003591
Cyanobacteriota
Geitlerinema sp. PCC 7407 [CP003591]
3976825
3976751
-
Arg
CCG
[Ensembl]
¡û
>C131004881
CP003630
Cyanobacteriota
Allocoleopsis franciscana PCC 7113 [CP003630]
7068124
7068199
+
Arg
CCG
[Ensembl]
¡û
Identical group No.341499 (2 seq.)
>WENV170613360
FUWD012799817
[FUWD] metagenome; unknown
145
218
+
Arg
CCG
[ENA]
¢þ
>SRA1018834
SRR035082.354606
454 Sequencing (SRP001803)
221
148
-
Arg
CCG
[SRA]
Identical group No.392110 (1 seq.)
>SRA1017961
SRR035082.222098
454 Sequencing (SRP001803)
377
303
-
Arg
CCG
[SRA]
Identical group No.392148 (1 seq.)
>SRA1018333
SRR035082.274723
454 Sequencing (SRP001803)
100
25
-
Arg
CCG
[SRA]
Identical group No.392209 (2 seq.)
>SRA1019109
SRR035082.403295
454 Sequencing (SRP001803)
66
141
+
Arg
CCG
[SRA]
>SRA1019772
SRR035082.526666
454 Sequencing (SRP001803)
66
141
+
Arg
CCG
[SRA]
Identical group No.412736 (6 seq.)
>WENV170621353
FUWD013056534
[FUWD] metagenome; unknown
171
99
-
Arg
CCG
[ENA]
¢þ
>WENV170629530
FUWD013272944
[FUWD] metagenome; unknown
171
99
-
Arg
CCG
[ENA]
¢þ
>SRA1017853
SRR035082.206712
454 Sequencing (SRP001803)
226
297
+
Arg
CCG
[SRA]
>SRA1019024
SRR035082.387331
454 Sequencing (SRP001803)
294
366
+
Arg
CCG
[SRA]
>SRA1029400
SRR035087.121458
454 Sequencing (SRP001808)
360
432
+
Arg
CCG
[SRA]
>SRA1048014
SRR035094.89016
454 Sequencing (SRP001815)
262
190
-
Arg
CCG
[SRA]
Identical group No.438237 (2 seq.)
>WENV170613256
FUWD012792374
[FUWD] metagenome; unknown
649
720
+
Arg
CCG
[ENA]
¢þ
>SRA1018827
SRR035082.354290
454 Sequencing (SRP001803)
50
121
+
Arg
CCG
[SRA]
Identical group No.438320 (6 seq.)
>WENV170620520
FUWD013033102
[FUWD] metagenome; unknown
411
339
-
Arg
CCG
[ENA]
¢þ
>WENV170628663
FUWD013250548
[FUWD] metagenome; unknown
4597
4669
+
Arg
CCG
[ENA]
¢þ
>SRA1017514
SRR035082.152993
454 Sequencing (SRP001803)
224
152
-
Arg
CCG
[SRA]
>SRA1041515
SRR035091.254569
454 Sequencing (SRP001812)
266
194
-
Arg
CCG
[SRA]
>SRA1043353
SRR035092.99448
454 Sequencing (SRP001813)
165
93
-
Arg
CCG
[SRA]
>SRA1044078
SRR035092.221082
454 Sequencing (SRP001813)
53
125
+
Arg
CCG
[SRA]
Identical group No.438328 (9 seq.)
>WENV170620793
FUWD013039838
[FUWD] metagenome; unknown
488
561
+
Arg
CCG
[ENA]
¢þ
>WENV170628945
FUWD013256969
[FUWD] metagenome; unknown
488
561
+
Arg
CCG
[ENA]
¢þ
>SRA1018098
SRR035082.240159
454 Sequencing (SRP001803)
149
222
+
Arg
CCG
[SRA]
>SRA1040010
SRR035091.16511
454 Sequencing (SRP001812)
305
233
-
Arg
CCG
[SRA]
>SRA1040629
SRR035091.124465
454 Sequencing (SRP001812)
305
232
-
Arg
CCG
[SRA]
>SRA1044803
SRR035092.347970
454 Sequencing (SRP001813)
335
408
+
Arg
CCG
[SRA]
>SRA1044837
SRR035092.354684
454 Sequencing (SRP001813)
492
419
-
Arg
CCG
[SRA]
>SRA1049364
SRR035095.64132
454 Sequencing (SRP001816)
285
357
+
Arg
CCG
[SRA]
>SRA1050467
SRR035095.269496
454 Sequencing (SRP001816)
225
297
+
Arg
CCG
[SRA]
Identical group No.475614 (1 seq.)
>SRA1017260
SRR035082.106759
454 Sequencing (SRP001803)
83
154
+
Arg
CCG
[SRA]
Identical group No.475645 (1 seq.)
>SRA1017582
SRR035082.163617
454 Sequencing (SRP001803)
201
127
-
Arg
CCG
[SRA]
Identical group No.475707 (1 seq.)
>SRA1018425
SRR035082.289533
454 Sequencing (SRP001803)
354
428
+
Arg
CCG
[SRA]
Identical group No.475714 (1 seq.)
>SRA1018481
SRR035082.298129
454 Sequencing (SRP001803)
103
177
+
Arg
CCG
[SRA]
Identical group No.475804 (1 seq.)
>SRA1019701
SRR035082.507347
454 Sequencing (SRP001803)
125
51
-
Arg
CCG
[SRA]
Identical group No.498425 (3 seq.)
>WENV170623671
FUWD013164393
[FUWD] metagenome; unknown
475
548
+
Arg
CCG
[ENA]
¢þ
>WENV170631952
FUWD013373035
[FUWD] metagenome; unknown
475
548
+
Arg
CCG
[ENA]
¢þ
>SRA1019469
SRR035082.462432
454 Sequencing (SRP001803)
209
136
-
Arg
CCG
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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