tRNA genes clustered and arranged according to each identical group

Line Islands Corals, viral fraction from water of Palmyra (SRP000141)

Anticodon = CAT

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.192867 (11 seq.)
>ENV08000899 ABML01068830 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 106 30 - Met CAT [ENA]
>ENV08000902 ABML01083310 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 89 13 - Met CAT [ENA]
>ENV08000984 ABMN01178865 marine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands) 13 89 + Met CAT [ENA]
>WENV170192649 CEPF01049123 [CEPF] marine metagenome genome assembly TARA_039_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 243 167 - Met CAT [ENA]
>WENV170221603 CEQB01050409 [CEQB] marine metagenome genome assembly TARA_052_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6767 6691 - Met CAT [ENA]
>WENV170267206 CERF01026558 [CERF] marine metagenome genome assembly TARA_072_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 211 287 + Met CAT [ENA]
>WENV170332925 CESX01092470 [CESX] marine metagenome genome assembly TARA_109_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 681 605 - Met CAT [ENA]
>WENV170842388 MDSZ01239384 [MDSZ] marine metagenome; seawater 3937 4013 + Met CAT [ENA]
>SRA1000902 SRR001049.66880 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 106 30 - Met CAT [SRA]
>SRA1000949 SRR001049.273405 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 89 13 - Met CAT [SRA]
>SRA1001017 SRR001051.246494 Line Islands Corals viral fraction from water of Fanning (SRP000143) 13 89 + Met CAT [SRA]
Identical group No.193203 (18 seq.)
>ENV08000896 ABML01061528 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 109 33 - Met CAT [ENA]
>WENV170345815 CETF01085338 [CETF] marine metagenome genome assembly TARA_109_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 405 481 + Met CAT [ENA]
>WENV170365679 CETN01147928 [CETN] marine metagenome genome assembly TARA_122_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 819 895 + Met CAT [ENA]
>WENV170407270 CEUH01121746 [CEUH] marine metagenome genome assembly TARA_137_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 805 729 - Met CAT [ENA]
>WENV170424400 CEUO01123639 [CEUO] marine metagenome genome assembly TARA_124_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 253 177 - Met CAT [ENA]
>WENV170580331 FUFK010045656 [FUFK] metagenome; unknown 659 735 + Met CAT [ENA]
>WENV170581871 FUFK010069114 [FUFK] metagenome; unknown 1613 1537 - Met CAT [ENA]
>WENV170582527 FUFK010084641 [FUFK] metagenome; unknown 711 635 - Met CAT [ENA]
>WENV170582647 FUFK010104959 [FUFK] metagenome; unknown 1433 1509 + Met CAT [ENA]
>WENV170584112 FUFK010192680 [FUFK] metagenome; unknown 658 734 + Met CAT [ENA]
>WENV170585371 FUFK010283750 [FUFK] metagenome; unknown 387 463 + Met CAT [ENA]
>WENV170586443 FUFK010416102 [FUFK] metagenome; unknown 7132 7208 + Met CAT [ENA]
>WENV170588110 FUFK010541786 [FUFK] metagenome; unknown 264 188 - Met CAT [ENA]
>WENV170594589 FUFK011379113 [FUFK] metagenome; unknown 272 348 + Met CAT [ENA]
>WENV170595285 FUFK011710999 [FUFK] metagenome; unknown 264 188 - Met CAT [ENA]
>WENV170752020 LUMI01025272 [LUMI] marine metagenome; Red Sea water column Station 34 - depth 10m 636 560 - Met CAT [ENA]
>WENV170757742 LUMQ01007892 [LUMQ] marine metagenome; Red Sea water column Station 12 - depth 25m 1272 1196 - Met CAT [ENA]
>SRA1000943 SRR001049.246817 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 109 33 - Met CAT [SRA]
Identical group No.215700 (18 seq.)
>ENV08000893 ABML01046401 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 19 95 + Met CAT [ENA]
>WENV183799979 PVBE010552365 [PVBE] marine metagenome; water 374 448 + Ile2 CAT [ENA]
>WENV170127582 CENP01223683 [CENP] marine metagenome genome assembly TARA_030_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 493 567 + Met CAT [ENA]
>WENV170352630 CETH01283247 [CETH] marine metagenome genome assembly TARA_122_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 281 354 + Met CAT [ENA]
>WENV170386451 CETY01171436 [CETY] marine metagenome genome assembly TARA_133_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 393 319 - Met CAT [ENA]
>WENV170389931 CEUA01055223 [CEUA] marine metagenome genome assembly TARA_132_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 633 709 + Met CAT [ENA]
>WENV170511681 CEVZ01108515 [CEVZ] marine metagenome genome assembly TARA_041_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 310 384 + Met CAT [ENA]
>WENV170512291 CEVZ01176749 [CEVZ] marine metagenome genome assembly TARA_041_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 356 429 + Met CAT [ENA]
>WENV170763663 LWDU01015722 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 983 908 - Met CAT [ENA]
>WENV170861229 MDTB01061250 [MDTB] marine metagenome; seawater 1413 1339 - Met CAT [ENA]
>WENV170865449 MDTB01119421 [MDTB] marine metagenome; seawater 41449 41525 + Met CAT [ENA]
>WENV170871709 MDTB01209367 [MDTB] marine metagenome; seawater 80 6 - Met CAT [ENA]
>WENV170888872 MDTC01265603 [MDTC] marine metagenome; seawater 2002 1928 - Met CAT [ENA]
>WENV021880 AACY020604445 Marine microbial communities from Global Ocean Sampling (GOS) 177 99 - Met CAT [ENA]
>SRA1000960 SRR001049.345530 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 19 95 + Met CAT [SRA]
>SRA1013207 SRR020514.70372 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 164 240 + Met CAT [SRA]
>WENV034346 AACY021602144 Marine microbial communities from Global Ocean Sampling (GOS) 415 493 + Met CAT [ENA]
>WENV053348 AACY023091067 Marine microbial communities from Global Ocean Sampling (GOS) 399 477 + Met CAT [ENA]
Identical group No.372410 (2 seq.)
>ENV08000925 ABML01205835 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 27 102 + Met CAT [ENA]
>SRA1000897 SRR001049.23359 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 27 102 + Met CAT [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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