tRNA genes clustered and arranged according to each identical group

Line Islands Corals, viral fraction from water of Palmyra (SRP000141)

Anticodon = TGC

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.193849 (24 seq.)
>WENV018243 AACY020503803 Marine microbial communities from Global Ocean Sampling (GOS) 279 203 - Ala TGC [ENA]
>ENV08000881 ABML01011701 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 52 127 + Ala TGC [ENA]
>WENV170136440 CENV01035139 [CENV] marine metagenome genome assembly TARA_031_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 693 766 + Ala TGC [ENA]
>WENV170206076 CEPT01154619 [CEPT] marine metagenome genome assembly TARA_039_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1662 1589 - Ala TGC [ENA]
>WENV170310743 CESM01067659 [CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 825 898 + Ala TGC [ENA]
>WENV170345289 CETE01261163 [CETE] marine metagenome genome assembly TARA_109_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1092 1167 + Ala TGC [ENA]
>WENV170410395 CEUJ01097893 [CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1483 1558 + Ala TGC [ENA]
>WENV170413657 CEUK01130730 [CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 612 537 - Ala TGC [ENA]
>WENV170424150 CEUO01075540 [CEUO] marine metagenome genome assembly TARA_124_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 504 429 - Ala TGC [ENA]
>WENV170436487 CEUT01059636 [CEUT] marine metagenome genome assembly TARA_125_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 487 562 + Ala TGC [ENA]
>WENV170461036 CEVC01252499 [CEVC] marine metagenome genome assembly TARA_125_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 417 342 - Ala TGC [ENA]
>WENV170472986 CEVG01338860 [CEVG] marine metagenome genome assembly TARA_140_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1305 1232 - Ala TGC [ENA]
>WENV170490400 CEVP01366010 [CEVP] marine metagenome genome assembly TARA_150_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 953 1026 + Ala TGC [ENA]
>WENV170496250 CEVS01042382 [CEVS] marine metagenome genome assembly TARA_151_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 7726 7799 + Ala TGC [ENA]
>WENV170499214 CEVT01129203 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1341 1268 - Ala TGC [ENA]
>WENV170502410 CEVU01358147 [CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 450 523 + Ala TGC [ENA]
>WENV170513145 CEVZ01353129 [CEVZ] marine metagenome genome assembly TARA_041_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 138 211 + Ala TGC [ENA]
>WENV170521572 CEWG01020034 [CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3272 3345 + Ala TGC [ENA]
>WENV170786289 MDSV01000860 [MDSV] marine metagenome; seawater 2291 2364 + Ala TGC [ENA]
>WENV170840245 MDSZ01200497 [MDSZ] marine metagenome; seawater 297 224 - Ala TGC [ENA]
>WENV170879606 MDTC01097776 [MDTC] marine metagenome; seawater 850 923 + Ala TGC [ENA]
>WENV170917478 MDTE01193332 [MDTE] marine metagenome; seawater 526 453 - Ala TGC [ENA]
>SRA1000906 SRR001049.78018 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 52 127 + Ala TGC [SRA]
>WENV008568 AACY020230470 Marine microbial communities from Global Ocean Sampling (GOS) 180 256 + Ala TGC [ENA]
Identical group No.286707 (11 seq.)
>ENV08000915 ABML01153120 Marine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands) 73 1 - Ala TGC [ENA]
>WENV170177467 CEOU01010700 [CEOU] marine metagenome genome assembly TARA_065_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 833 908 + Ala TGC [ENA]
>WENV170186726 CEPA01076940 [CEPA] marine metagenome genome assembly TARA_052_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 691 766 + Ala TGC [ENA]
>WENV170192400 CEPE01115202 [CEPE] marine metagenome genome assembly TARA_042_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1424 1499 + Ala TGC [ENA]
>WENV170193934 CEPI01073638 [CEPI] marine metagenome genome assembly TARA_041_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 127 52 - Ala TGC [ENA]
>WENV170201118 CEPP01078152 [CEPP] marine metagenome genome assembly TARA_042_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2038 1963 - Ala TGC [ENA]
>WENV170202658 CEPR01101505 [CEPR] marine metagenome genome assembly TARA_039_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 217 292 + Ala TGC [ENA]
>WENV170290040 CERY01075535 [CERY] marine metagenome genome assembly TARA_065_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 422 347 - Ala TGC [ENA]
>WENV170824205 MDSY01071671 [MDSY] marine metagenome; seawater 2686 2761 + Ala TGC [ENA]
>WENV170836528 MDSZ01133138 [MDSZ] marine metagenome; seawater 2438 2363 - Ala TGC [ENA]
>SRA1000959 SRR001049.336454 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 73 1 - Ala TGC [SRA]
Identical group No.395765 (2 seq.)
>SRA1000942 SRR001049.245820 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 1 76 + Ala TGC [SRA]
>SRA1000948 SRR001049.270468 Line Islands Corals, viral fraction from water of Palmyra (SRP000141) 1 76 + Ala TGC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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