tRNA genes clustered and arranged according to each identical group

Synergistota

Anticodon = ACG

HIT: 17 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.279666 (15 seq.)
>WENV180096033 MTBK01104123 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 114 190 + Arg ACG [ENA] ¢þ
>WENV181230474 OFEK01001116 [OFEK] activated sludge metagenome; Anaerobic digester 14067 14143 + Arg ACG [ENA] ¢þ
>WENV183514096 OMKS01011869 [OMKS] sediment metagenome; hot spring sediment 682 758 + Arg ACG [ENA] ¢þ
>WENV170678365 LDZT01014057 [LDZT] terrestrial metagenome; oil reservoir sample SB1 5286 5362 + Arg ACG [ENA] ¢þ
>WENV170678624 LDZU01003411 [LDZU] terrestrial metagenome; oil reservoir sample SB2 2465 2389 - Arg ACG [ENA] ¢þ
>WENV170718510 LSQX01079009 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 11289 11365 + Arg ACG [ENA] ¢þ
>WENV170967221 MTKW01000525 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 37699 37775 + Arg ACG [ENA] ¢þ
>WENV170971697 MTKX01009951 [MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 85639 85563 - Arg ACG [ENA] ¢þ
>WENV170974014 MTKY01052901 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 12224 12300 + Arg ACG [ENA] ¢þ
>WENV170974525 MTKY01064577 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 2908 2984 + Arg ACG [ENA] ¢þ
>WENV170975867 MTKZ01002879 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 97023 97099 + Arg ACG [ENA] ¢þ
>W1610613717 LGGE01000050 Synergistota Synergistales bacterium 57_84 [LGGE] 5286 5362 + Arg ACG [ENA] ¡û
>W1610614162 LGGV01000036 Synergistota Synergistales bacterium 58_81 [LGGV] 2465 2389 - Arg ACG [ENA] ¡û
>W1710734870 LGGE01000050 Synergistota Synergistales bacterium 57_84 [LGGE] 5286 5362 + Arg ACG [ENA] ¡û
>W1710735245 LGGV01000036 Synergistota Synergistales bacterium 58_81 [LGGV] 2465 2389 - Arg ACG [ENA] ¡û
Identical group No.279797 (10 seq.)
>WENV170561640 CZCA01018079 [CZCA] anaerobic digester metagenome; anaerobic digester 493 569 + Arg ACG [ENA] ¢þ
>WENV170563078 CZCB01009701 [CZCB] anaerobic digester metagenome; anaerobic digester 4799 4875 + Arg ACG [ENA] ¢þ
>WENV170687033 LFRM01174037 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 2236 2312 + Arg ACG [ENA] ¢þ
>WENV170690219 LFRM01331089 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 177 253 + Arg ACG [ENA] ¢þ
>WENV170717097 LSQX01024469 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 9917 9993 + Arg ACG [ENA] ¢þ
>WENV170726605 LSQX01387557 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 1955 1879 - Arg ACG [ENA] ¢þ
>WENV170967932 MTKW01004494 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 14589 14665 + Arg ACG [ENA] ¢þ
>WENV170968213 MTKW01007162 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 4012 4088 + Arg ACG [ENA] ¢þ
>C121008074 CP003198 Synergistota Acetomicrobium mobile DSM 13181 [CP003198] 1430591 1430515 - Arg ACG [Ensembl] ¡û
>W1710594068 FSQZ01000001 Synergistota Acetomicrobium flavidum [FSQZ] 1730833 1730909 + Arg ACG [ENA] ¡û
Identical group No.280292 (4 seq.)
>WENV170676941 LDZS01003283 [LDZS] terrestrial metagenome; oil reservoir sample K3 4018 4094 + Arg ACG [ENA] ¢þ
>WENV170970632 MTKW01080942 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 1237 1313 + Arg ACG [ENA] ¢þ
>W1610613309 LGFQ01000103 Synergistota Synergistales bacterium 54_24 [LGFQ] 4018 4094 + Arg ACG [ENA] ¡û
>W1710734516 LGFQ01000103 Synergistota Synergistales bacterium 54_24 [LGFQ] 4018 4094 + Arg ACG [ENA] ¡û
Identical group No.290914 (14 seq.)
>W1711137610 LVBQ01000023 Synergistota Synergistales bacterium Syner_03 [LVBQ] 21185 21261 + Arg ACG [ENA] ¡û
>C171050569 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 1415682 1415606 - Arg ACG - ¡û
>WENV181908564 OGYB01000107 [OGYB] human gut metagenome; faeces 42062 42138 + Arg ACG [ENA] ¢þ
>WENV181914619 OGYF01000561 [OGYF] human gut metagenome; faeces 7868 7792 - Arg ACG [ENA] ¢þ
>WENV182031389 OHCS01014556 [OHCS] human gut metagenome; feces 765 689 - Arg ACG [ENA] ¢þ
>WENV182180484 OHNO01001362 [OHNO] human gut metagenome; feces 7002 7078 + Arg ACG [ENA] ¢þ
>WENV182221015 OHQS01030161 [OHQS] human gut metagenome; feces 96 20 - Arg ACG [ENA] ¢þ
>WENV182538179 OIXH01048063 [OIXH] human gut metagenome; faeces 533 609 + Arg ACG [ENA] ¢þ
>WENV170683773 LFRM01003206 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 12338 12414 + Arg ACG [ENA] ¢þ
>WENV170684152 LFRM01023267 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 1786 1862 + Arg ACG [ENA] ¢þ
>W141452053 JFBR01000002 Synergistota Cloacibacillus evryensis DSM 19522 [JFBR] 30153 30077 - Arg ACG [ENA] ¡û
>WENV170978305 MTKZ01046536 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 750 826 + Arg ACG [ENA] ¢þ
>W121000464 ACUH01000019 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 7507 7583 + Arg ACG [ENA] ¡û
>W1610948730 LVBQ01000023 Synergistota Synergistales bacterium Syner_03 [LVBQ] 21185 21261 + Arg ACG [ENA] ¡û
Identical group No.304073 (2 seq.)
>W1712039394 NFJQ01000015 Synergistota Cloacibacillus sp. An23 [NFJQ] 6992 6916 - Arg ACG [ENA] ¡û
>WENV183580372 OOCM01079984 [OOCM] human gut metagenome; human gut 72 148 + Arg ACG [ENA] ¢þ
Identical group No.306789 (1 seq.)
>C10100323 CP001997 Synergistota Aminobacterium colombiense DSM 12261 [CP001997] 1275956 1275880 - Arg ACG [Ensembl] ¡û
Identical group No.310839 (17 seq.)
>WENV180728347 ODGU01040583 [ODGU] human metagenome; G_DNA_Supragingival plaque 309 385 + Arg ACG [ENA] ¢þ
>WENV180734686 ODGZ01017820 [ODGZ] human metagenome; G_DNA_Supragingival plaque 335 259 - Arg ACG [ENA] ¢þ
>WENV180751493 ODHS01058578 [ODHS] human metagenome; G_DNA_Supragingival plaque 149 73 - Arg ACG [ENA] ¢þ
>WENV180798153 ODJB01297514 [ODJB] human metagenome; G_DNA_Supragingival plaque 102 26 - Arg ACG [ENA] ¢þ
>WENV180809639 ODJK01030964 [ODJK] human metagenome; G_DNA_Subgingival plaque 430 354 - Arg ACG [ENA] ¢þ
>WENV180943693 ODUC01001687 [ODUC] human metagenome; G_DNA_Supragingival plaque 5860 5784 - Arg ACG [ENA] ¢þ
>WENV180951930 ODUH01077894 [ODUH] human metagenome; G_DNA_Subgingival plaque 372 448 + Arg ACG [ENA] ¢þ
>WENV180976643 ODUY01185176 [ODUY] human metagenome; G_DNA_Supragingival plaque 238 314 + Arg ACG [ENA] ¢þ
>WENV180981872 ODVE01078069 [ODVE] human metagenome; G_DNA_Supragingival plaque 307 231 - Arg ACG [ENA] ¢þ
>WENV181050540 ODYD01024852 [ODYD] human metagenome; G_DNA_Supragingival plaque 1334 1410 + Arg ACG [ENA] ¢þ
>WENV181077339 OEAP01043378 [OEAP] human metagenome; G_DNA_Supragingival plaque 742 818 + Arg ACG [ENA] ¢þ
>WENV181080771 OEAS01079885 [OEAS] human metagenome; G_DNA_Supragingival plaque 421 497 + Arg ACG [ENA] ¢þ
>WENV181091626 OEBC01060686 [OEBC] human metagenome; G_DNA_Supragingival plaque 152 76 - Arg ACG [ENA] ¢þ
>WENV181180093 OEJT01076158 [OEJT] human metagenome; G_DNA_Supragingival plaque 305 229 - Arg ACG [ENA] ¢þ
>WENV181182566 OEJV01017241 [OEJV] human metagenome; G_DNA_Supragingival plaque 869 945 + Arg ACG [ENA] ¢þ
>WENV183509789 OMHJ01013764 [OMHJ] human oral metagenome; human oral 284 360 + Arg ACG [ENA] ¢þ
>C161104032 FP929056 Synergistota Fretibacterium fastidiosum SGP1 [FP929056] 2471780 2471704 - Arg ACG - ¡û
Identical group No.315143 (7 seq.)
>WENV183515487 OMKS01067775 [OMKS] sediment metagenome; hot spring sediment 130 206 + Arg ACG [ENA] ¢þ
>WENV170677148 LDZT01003252 [LDZT] terrestrial metagenome; oil reservoir sample SB1 16221 16145 - Arg ACG [ENA] ¢þ
>WENV170679058 LDZU01006831 [LDZU] terrestrial metagenome; oil reservoir sample SB2 4905 4829 - Arg ACG [ENA] ¢þ
>W1610613609 LGGB01000004 Synergistota Synergistales bacterium 53_16 [LGGB] 16221 16145 - Arg ACG [ENA] ¡û
>W1610614505 LGHG01000082 Synergistota Synergistales bacterium 54_9 [LGHG] 4905 4829 - Arg ACG [ENA] ¡û
>W1710734781 LGGB01000004 Synergistota Synergistales bacterium 53_16 [LGGB] 16221 16145 - Arg ACG [ENA] ¡û
>W1710735486 LGHG01000082 Synergistota Synergistales bacterium 54_9 [LGHG] 4905 4829 - Arg ACG [ENA] ¡û
Identical group No.317802 (4 seq.)
>WENV170563849 CZCB01032031 [CZCB] anaerobic digester metagenome; anaerobic digester 2035 1959 - Arg ACG [ENA] ¢þ
>WENV170676489 LDZS01000097 [LDZS] terrestrial metagenome; oil reservoir sample K3 13 89 + Arg ACG [ENA] ¢þ
>W09126637 ACJX01000213 Synergistota Acetomicrobium hydrogeniformans ATCC BAA-1850 [ACJX] 105160 105084 - Arg ACG [ENA] ¡û
>W1710530822 FNPD01000002 Synergistota Acetomicrobium thermoterrenum DSM 13490 [FNPD] 108224 108148 - Arg ACG [ENA] ¡û
Identical group No.318595 (4 seq.)
>WENV170676987 LDZS01003930 [LDZS] terrestrial metagenome; oil reservoir sample K3 3645 3721 + Arg ACG [ENA] ¢þ
>C121005699 CP003096 Synergistota Thermovirga lienii DSM 17291 [CP003096] 1252713 1252637 - Arg ACG [Ensembl] ¡û
>W1610613349 LGFS01000092 Synergistota Thermovirga lienii [LGFS] 3645 3721 + Arg ACG [ENA] ¡û
>W1710734556 LGFS01000092 Synergistota Thermovirga lienii [LGFS] 3645 3721 + Arg ACG [ENA] ¡û
Identical group No.345107 (6 seq.)
>W1711744522 MUHX01000056 Synergistota Pyramidobacter sp. C12-8 [MUHX] 1129 1053 - Arg ACG [ENA] ¡û
>WENV181989279 OHAO01005548 [OHAO] human gut metagenome; faeces 294 218 - Arg ACG [ENA] ¢þ
>WENV183419819 OMAZ01050421 [OMAZ] human gut metagenome; feces 598 522 - Arg ACG [ENA] ¢þ
>WENV183764127 PPYE01315554 [PPYE] human gut metagenome; stool from patient with ulcerative colitis 1611 1535 - Arg ACG [ENA] ¢þ
>W10113023 ADFP01000051 Synergistota Pyramidobacter piscolens W5455 [ADFP] 5330 5254 - Arg ACG [ENA] ¡û
>W11116250 ADFP01000051 Synergistota Pyramidobacter piscolens W5455 [ADFP] 5330 5254 - Arg ACG [ENA] ¡û
Identical group No.350447 (2 seq.)
>W1711629570 MPPC01000024 Synergistota Aminobacterium sp. EBM-42 [MPPC] 153964 154040 + Arg ACG [ENA] ¡û
>WENV170719189 LSQX01104951 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 47513 47589 + Arg ACG [ENA] ¢þ
Identical group No.352334 (5 seq.)
>W1711744523 MUHX01000056 Synergistota Pyramidobacter sp. C12-8 [MUHX] 1012 936 - Arg ACG [ENA] ¡û
>WENV181989280 OHAO01005548 [OHAO] human gut metagenome; faeces 179 103 - Arg ACG [ENA] ¢þ
>WENV183764128 PPYE01315554 [PPYE] human gut metagenome; stool from patient with ulcerative colitis 1496 1420 - Arg ACG [ENA] ¢þ
>W10113024 ADFP01000051 Synergistota Pyramidobacter piscolens W5455 [ADFP] 5213 5137 - Arg ACG [ENA] ¡û
>W11116251 ADFP01000051 Synergistota Pyramidobacter piscolens W5455 [ADFP] 5213 5137 - Arg ACG [ENA] ¡û
Identical group No.352500 (7 seq.)
>WENV181311599 OFJB01005337 [OFJB] sludge metagenome; sludge 533 457 - Arg ACG [ENA] ¢þ
>WENV181409295 OGCI01000070 [OGCI] hot springs metagenome; Hot spring water 28438 28362 - Arg ACG [ENA] ¢þ
>W141278969 JAFY01000007 Synergistota Aminiphilus circumscriptus DSM 16581 [JAFY] 697160 697236 + Arg ACG [ENA] ¡û
>W09110150 ABUW01000006 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [ABUW] 18731 18807 + Arg ACG [ENA] ¡û
>C10113010 CP001818 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [CP001818] 1134764 1134688 - Arg ACG [Ensembl] ¡û
>W11138631 AEIV01000002 Synergistota Aminomonas paucivorans DSM 12260 [AEIV] 243197 243121 - Arg ACG [ENA] ¡û
>W121031647 AHGV01000001 Synergistota Thermanaerovibrio velox DSM 12556 [AHGV] 1009097 1009021 - Arg ACG [ENA] ¡û
Identical group No.363955 (3 seq.)
>W141146877 AWWC01000028 Synergistota Jonquetella sp. BV3C21 [AWWC] 759 683 - Arg ACG [ENA] ¡û
>W09132965 ACOO02000018 Synergistota Jonquetella anthropi E3_33 E1 [ACOO] 131034 131110 + Arg ACG [ENA] ¡û
>W121017489 AGRU01000003 Synergistota Jonquetella anthropi DSM 22815 [AGRU] 237621 237697 + Arg ACG [ENA] ¡û
Identical group No.368346 (6 seq.)
>WENV183710932 PDWI01056758 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 533 457 - Arg ACG [ENA] ¢þ
>WENV183717232 PDWJ01000610 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 14837 14761 - Arg ACG [ENA] ¢þ
>WENV183721331 PDWJ01064777 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 1495 1419 - Arg ACG [ENA] ¢þ
>WENV170657164 JTFO01094296 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 115 191 + Arg ACG [ENA] ¢þ
>W09108926 ABTR01000008 Synergistota Dethiosulfovibrio peptidovorans DSM 11002 [ABTR] 28761 28837 + Arg ACG [ENA] ¡û
>W1710608696 FXBB01000013 Synergistota Dethiosulfovibrio salsuginis [FXBB] 6942 6866 - Arg ACG [ENA] ¡û
Identical group No.441660 (1 seq.)
>W141278992 JAFZ01000001 Synergistota Aminobacterium mobile DSM 12262 [JAFZ] 935507 935583 + Arg ACG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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