tRNA genes clustered and arranged according to each identical group

Synergistota

Anticodon = CCA

HIT: 16 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.242481 (56 seq.)
>W1711137623 LVBQ01000053 Synergistota Synergistales bacterium Syner_03 [LVBQ] 295 372 + Trp CCA [ENA] ¡û
>W1712039369 NFJQ01000006 Synergistota Cloacibacillus sp. An23 [NFJQ] 77262 77339 + Trp CCA [ENA] ¡û
>C171050554 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 3564022 3563945 - Trp CCA - ¡û
>WENV180220974 OBAX01001378 [OBAX] human gut metagenome; human gut 800 723 - Trp CCA [ENA] ¢þ
>WENV180221974 OBBB01027630 [OBBB] human gut metagenome; human gut 299 222 - Trp CCA [ENA] ¢þ
>WENV180222350 OBBD01001901 [OBBD] human gut metagenome; human gut 469 546 + Trp CCA [ENA] ¢þ
>WENV180223721 OBBH01007960 [OBBH] human gut metagenome; human gut 287 364 + Trp CCA [ENA] ¢þ
>WENV180223892 OBBI01000196 [OBBI] human gut metagenome; human gut 2279 2202 - Trp CCA [ENA] ¢þ
>WENV180224600 OBBK01002788 [OBBK] human gut metagenome; human gut 2279 2202 - Trp CCA [ENA] ¢þ
>WENV180240263 OBDC01002483 [OBDC] human gut metagenome; human gut 731 654 - Trp CCA [ENA] ¢þ
>WENV180240461 OBDD01000206 [OBDD] human gut metagenome; human gut 4735 4812 + Trp CCA [ENA] ¢þ
>WENV180246576 OBDP01008388 [OBDP] human gut metagenome; human gut 296 373 + Trp CCA [ENA] ¢þ
>WENV180274622 OBHE01002171 [OBHE] human gut metagenome; human gut 318 395 + Trp CCA [ENA] ¢þ
>WENV180544147 OCIP01005632 [OCIP] human gut metagenome; human gut 296 373 + Trp CCA [ENA] ¢þ
>WENV180544425 OCIQ01004451 [OCIQ] human gut metagenome; human gut 1346 1269 - Trp CCA [ENA] ¢þ
>WENV180545385 OCIT01005244 [OCIT] human gut metagenome; human gut 296 373 + Trp CCA [ENA] ¢þ
>WENV180548532 OCIX01001897 [OCIX] human gut metagenome; human gut 2285 2208 - Trp CCA [ENA] ¢þ
>WENV180623217 OCQE01002731 [OCQE] human gut metagenome; human gut 2285 2208 - Trp CCA [ENA] ¢þ
>WENV180629725 OCQP01182991 [OCQP] human gut metagenome; human gut 89 166 + Trp CCA [ENA] ¢þ
>WENV181641924 OGNF01034961 [OGNF] metagenome; Human gut stool 1134 1211 + Trp CCA [ENA] ¢þ
>WENV181908756 OGYB01000559 [OGYB] human gut metagenome; faeces 298 375 + Trp CCA [ENA] ¢þ
>WENV181910659 OGYC01028334 [OGYC] human gut metagenome; faeces 156 233 + Trp CCA [ENA] ¢þ
>WENV181915432 OGYF01006933 [OGYF] human gut metagenome; faeces 296 373 + Trp CCA [ENA] ¢þ
>WENV181980261 OHAF01015426 [OHAF] human gut metagenome; faeces 1291 1368 + Trp CCA [ENA] ¢þ
>WENV182005936 OHBE01033537 [OHBE] human gut metagenome; faeces 1063 986 - Trp CCA [ENA] ¢þ
>WENV182031140 OHCS01003583 [OHCS] human gut metagenome; feces 623 700 + Trp CCA [ENA] ¢þ
>WENV182143641 OHKV01008158 [OHKV] human gut metagenome; feces 1710 1787 + Trp CCA [ENA] ¢þ
>WENV182172753 OHMY01046706 [OHMY] human gut metagenome; feces 602 525 - Trp CCA [ENA] ¢þ
>WENV182180458 OHNO01001164 [OHNO] human gut metagenome; feces 9528 9605 + Trp CCA [ENA] ¢þ
>WENV182212638 OHQG01002718 [OHQG] human gut metagenome; feces 3359 3282 - Trp CCA [ENA] ¢þ
>WENV182215922 OHQM01006666 [OHQM] human gut metagenome; feces 1703 1626 - Trp CCA [ENA] ¢þ
>WENV182274863 OHUK01017813 [OHUK] human gut metagenome; feces 1123 1200 + Trp CCA [ENA] ¢þ
>WENV182537801 OIXH01018727 [OIXH] human gut metagenome; faeces 298 375 + Trp CCA [ENA] ¢þ
>WENV182686757 OJNZ01037606 [OJNZ] human gut metagenome; human gut 72 149 + Trp CCA [ENA] ¢þ
>WENV182883889 OKSB01057958 [OKSB] human gut metagenome; faeces 852 775 - Trp CCA [ENA] ¢þ
>WENV182891984 OKSH01010244 [OKSH] human gut metagenome; faeces 577 500 - Trp CCA [ENA] ¢þ
>WENV182906669 OKTD01015424 [OKTD] human gut metagenome; feces 919 996 + Trp CCA [ENA] ¢þ
>WENV183039470 OLGB01007527 [OLGB] human gut metagenome; faeces 298 375 + Trp CCA [ENA] ¢þ
>WENV183156957 OLOS01066008 [OLOS] human gut metagenome; faeces 492 569 + Trp CCA [ENA] ¢þ
>WENV170651017 JRYE01147346 [JRYE] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 4 ppm DO 48 125 + Trp CCA [ENA] ¢þ
>WENV170655880 JTFN01090113 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 544 467 - Trp CCA [ENA] ¢þ
>WENV170685741 LFRM01107040 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 12 89 + Trp CCA [ENA] ¢þ
>WENV170688885 LFRM01266303 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 1447 1524 + Trp CCA [ENA] ¢þ
>WENV170690820 LFRM01363845 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 426 503 + Trp CCA [ENA] ¢þ
>WENV170725608 LSQX01349331 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 266 343 + Trp CCA [ENA] ¢þ
>WENV170726515 LSQX01383709 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 5787 5710 - Trp CCA [ENA] ¢þ
>W141452035 JFBR01000002 Synergistota Cloacibacillus evryensis DSM 19522 [JFBR] 2178680 2178603 - Trp CCA [ENA] ¡û
>WENV170976113 MTKZ01004630 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 2125 2048 - Trp CCA [ENA] ¢þ
>W141701192 JMKI01000005 Synergistota Synergistes jonesii [JMKI] 11760 11683 - Trp CCA [ENA] ¡û
>W121000455 ACUH01000001 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 23472 23395 - Trp CCA [ENA] ¡û
>W1610948743 LVBQ01000053 Synergistota Synergistales bacterium Syner_03 [LVBQ] 295 372 + Trp CCA [ENA] ¡û
>W1710629235 JPZQ01000006 Synergistota Synergistes jonesii [JPZQ] 10735 10658 - Trp CCA [ENA] ¡û
>W1710629278 JPZR01000006 Synergistota Synergistes jonesii [JPZR] 10735 10658 - Trp CCA [ENA] ¡û
>W1710629321 JPZS01000004 Synergistota Synergistes jonesii [JPZS] 10735 10658 - Trp CCA [ENA] ¡û
>W1710631839 JQEK01000033 Synergistota Synergistes jonesii [JQEK] 96915 96992 + Trp CCA [ENA] ¡û
>W1710631869 JQEL01000004 Synergistota Synergistes jonesii [JQEL] 10735 10658 - Trp CCA [ENA] ¡û
Identical group No.253210 (4 seq.)
>WENV181409526 OGCI01000259 [OGCI] hot springs metagenome; Hot spring water 67486 67409 - Trp CCA [ENA] ¢þ
>W09110112 ABUW01000002 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [ABUW] 291 368 + Trp CCA [ENA] ¡û
>C10112996 CP001818 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [CP001818] 1583744 1583667 - Trp CCA [Ensembl] ¡û
>W11138627 AEIV01000002 Synergistota Aminomonas paucivorans DSM 12260 [AEIV] 647053 646976 - Trp CCA [ENA] ¡û
Identical group No.264344 (1 seq.)
>W121031609 AHGV01000001 Synergistota Thermanaerovibrio velox DSM 12556 [AHGV] 287436 287513 + Trp CCA [ENA] ¡û
Identical group No.294014 (7 seq.)
>W1711744508 MUHX01000030 Synergistota Pyramidobacter sp. C12-8 [MUHX] 338 414 + Trp CCA [ENA] ¡û
>WENV181638900 OGNC01028858 [OGNC] metagenome; Human gut stool 1025 949 - Trp CCA [ENA] ¢þ
>WENV181989428 OHAO01009542 [OHAO] human gut metagenome; faeces 3160 3084 - Trp CCA [ENA] ¢þ
>WENV183764059 PPYE01312981 [PPYE] human gut metagenome; stool from patient with ulcerative colitis 1350 1426 + Trp CCA [ENA] ¢þ
>WENV183787270 PPYF01318842 [PPYF] human gut metagenome; stool from patient with Crohn's disease 2403 2327 - Trp CCA [ENA] ¢þ
>W10113032 ADFP01000084 Synergistota Pyramidobacter piscolens W5455 [ADFP] 289 365 + Trp CCA [ENA] ¡û
>W11116259 ADFP01000084 Synergistota Pyramidobacter piscolens W5455 [ADFP] 289 365 + Trp CCA [ENA] ¡û
Identical group No.302266 (3 seq.)
>WENV170008200 AMZC01004373 [AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor 4771 4847 + Trp CCA [ENA] ¢þ
>C121008045 CP003198 Synergistota Acetomicrobium mobile DSM 13181 [CP003198] 204068 204144 + Trp CCA [Ensembl] ¡û
>W1710594074 FSQZ01000001 Synergistota Acetomicrobium flavidum [FSQZ] 873297 873221 - Trp CCA [ENA] ¡û
Identical group No.317787 (3 seq.)
>WENV170563756 CZCB01028390 [CZCB] anaerobic digester metagenome; anaerobic digester 3855 3779 - Trp CCA [ENA] ¢þ
>W09126626 ACJX01000176 Synergistota Acetomicrobium hydrogeniformans ATCC BAA-1850 [ACJX] 30509 30433 - Trp CCA [ENA] ¡û
>W1710530847 FNPD01000012 Synergistota Acetomicrobium thermoterrenum DSM 13490 [FNPD] 15531 15455 - Trp CCA [ENA] ¡û
Identical group No.318590 (3 seq.)
>WENV170676927 LDZS01003208 [LDZS] terrestrial metagenome; oil reservoir sample K3 188 264 + Trp CCA [ENA] ¢þ
>W1610613295 LGFQ01000028 Synergistota Synergistales bacterium 54_24 [LGFQ] 188 264 + Trp CCA [ENA] ¡û
>W1710734502 LGFQ01000028 Synergistota Synergistales bacterium 54_24 [LGFQ] 188 264 + Trp CCA [ENA] ¡û
Identical group No.363243 (3 seq.)
>W141146829 AWWC01000001 Synergistota Jonquetella sp. BV3C21 [AWWC] 261 337 + Trp CCA [ENA] ¡û
>W09132986 ACOO02000031 Synergistota Jonquetella anthropi E3_33 E1 [ACOO] 118927 118851 - Trp CCA [ENA] ¡û
>W121017515 AGRU01000004 Synergistota Jonquetella anthropi DSM 22815 [AGRU] 209774 209698 - Trp CCA [ENA] ¡û
Identical group No.374081 (1 seq.)
>W131157314 AQRZ01000027 Synergistota Synergistetes bacterium JGI 0000079-D21 [AQRZ] 11705 11629 - Trp CCA [ENA] ¡û
Identical group No.423923 (1 seq.)
>W09108890 ABTR01000001 Synergistota Dethiosulfovibrio peptidovorans DSM 11002 [ABTR] 421985 421909 - Trp CCA [ENA] ¡û
Identical group No.429602 (1 seq.)
>W1710608701 FXBB01000019 Synergistota Dethiosulfovibrio salsuginis [FXBB] 457 533 + Trp CCA [ENA] ¡û
Identical group No.490519 (13 seq.)
>W1711137576 LVBO01000616 Synergistota Synergistales bacterium Syner_01 [LVBO] 254 329 + Trp CCA [ENA] ¡û
>W1711137585 LVBP01000107 Synergistota Synergistales bacterium Syner_02 [LVBP] 7409 7334 - Trp CCA [ENA] ¡û
>W1711629535 MPPC01000004 Synergistota Aminobacterium sp. EBM-42 [MPPC] 85925 85850 - Trp CCA [ENA] ¡û
>WENV180098185 MTBK01232328 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 368 443 + Trp CCA [ENA] ¢þ
>WENV180346741 OBLN01259180 [OBLN] sediment metagenome; sediment 97 172 + Trp CCA [ENA] ¢þ
>W141278940 JAFY01000005 Synergistota Aminiphilus circumscriptus DSM 16581 [JAFY] 461985 461910 - Trp CCA [ENA] ¡û
>W141279025 JAFZ01000004 Synergistota Aminobacterium mobile DSM 12262 [JAFZ] 90213 90138 - Trp CCA [ENA] ¡û
>WENV170657043 JTFO01071962 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 367 442 + Trp CCA [ENA] ¢þ
>WENV170720778 LSQX01166068 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 450 525 + Trp CCA [ENA] ¢þ
>WENV170974269 MTKY01056430 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 240 315 + Trp CCA [ENA] ¢þ
>C10100295 CP001997 Synergistota Aminobacterium colombiense DSM 12261 [CP001997] 331977 332052 + Trp CCA [Ensembl] ¡û
>W1610948696 LVBO01000616 Synergistota Synergistales bacterium Syner_01 [LVBO] 254 329 + Trp CCA [ENA] ¡û
>W1610948705 LVBP01000107 Synergistota Synergistales bacterium Syner_02 [LVBP] 7409 7334 - Trp CCA [ENA] ¡û
Identical group No.500244 (5 seq.)
>WENV183514348 OMKS01016815 [OMKS] sediment metagenome; hot spring sediment 3449 3524 + Trp CCA [ENA] ¢þ
>WENV170676983 LDZS01003870 [LDZS] terrestrial metagenome; oil reservoir sample K3 5002 4927 - Trp CCA [ENA] ¢þ
>C121005669 CP003096 Synergistota Thermovirga lienii DSM 17291 [CP003096] 472523 472598 + Trp CCA [Ensembl] ¡û
>W1610613345 LGFS01000032 Synergistota Thermovirga lienii [LGFS] 5002 4927 - Trp CCA [ENA] ¡û
>W1710734552 LGFS01000032 Synergistota Thermovirga lienii [LGFS] 5002 4927 - Trp CCA [ENA] ¡û
Identical group No.500253 (8 seq.)
>WENV181230280 OFEK01000582 [OFEK] activated sludge metagenome; Anaerobic digester 35540 35465 - Trp CCA [ENA] ¢þ
>WENV183514390 OMKS01018074 [OMKS] sediment metagenome; hot spring sediment 48 123 + Trp CCA [ENA] ¢þ
>WENV170678367 LDZT01014097 [LDZT] terrestrial metagenome; oil reservoir sample SB1 2816 2741 - Trp CCA [ENA] ¢þ
>WENV170678632 LDZU01003454 [LDZU] terrestrial metagenome; oil reservoir sample SB2 3451 3376 - Trp CCA [ENA] ¢þ
>W1610613719 LGGE01000090 Synergistota Synergistales bacterium 57_84 [LGGE] 2816 2741 - Trp CCA [ENA] ¡û
>W1610614170 LGGV01000079 Synergistota Synergistales bacterium 58_81 [LGGV] 3451 3376 - Trp CCA [ENA] ¡û
>W1710734872 LGGE01000090 Synergistota Synergistales bacterium 57_84 [LGGE] 2816 2741 - Trp CCA [ENA] ¡û
>W1710735253 LGGV01000079 Synergistota Synergistales bacterium 58_81 [LGGV] 3451 3376 - Trp CCA [ENA] ¡û
Identical group No.504141 (3 seq.)
>WENV170679066 LDZU01006973 [LDZU] terrestrial metagenome; oil reservoir sample SB2 381 456 + Trp CCA [ENA] ¢þ
>W1610614513 LGHG01000224 Synergistota Synergistales bacterium 54_9 [LGHG] 381 456 + Trp CCA [ENA] ¡û
>W1710735494 LGHG01000224 Synergistota Synergistales bacterium 54_9 [LGHG] 381 456 + Trp CCA [ENA] ¡û
Identical group No.538075 (3 seq.)
>WENV180809650 ODJK01032254 [ODJK] human metagenome; G_DNA_Subgingival plaque 269 344 + Trp CCA [ENA] ¢þ
>WENV181081396 OEAS01198706 [OEAS] human metagenome; G_DNA_Supragingival plaque 282 357 + Trp CCA [ENA] ¢þ
>C161104020 FP929056 Synergistota Fretibacterium fastidiosum SGP1 [FP929056] 447649 447724 + Trp CCA - ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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