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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183543593
OOAO01000002
144589
Actinomycetota
ACG
Arg
>WENV183544100
OOAO01000755
145347
Actinomycetota
CAA
Leu
>WENV183543771
OOAO01000121
91808
Actinomycetota
CAG
Leu
>WENV183543866
OOAO01000226
145269
Actinomycetota
CAT
Met
>WENV183543770
OOAO01000121
411554
Actinomycetota
CCC
Gly
>WENV183544011
OOAO01000534
254857
Actinomycetota
CCG
Arg
>WENV183544411
OOAO01002831
235153
Actinomycetota
CCT
Arg
>WENV183544079
OOAO01000723
235149
Actinomycetota
CCT
Arg
>WENV183543611
OOAO01000005
37070
Actinomycetota
CGA
Ser
>WENV183543604
OOAO01000005
235121
Actinomycetota
CGT
Thr
>WENV183543603
OOAO01000005
338148
Actinomycetota
CTG
Gln
>WENV183544690
OOAO01013055
414234
Actinomycetota
CTG
Gln
>WENV183544452
OOAO01003310
144636
Actinomycetota
GAT
Ile
>WENV183544610
OOAO01006923
245301
Actinomycetota
GCC
Gly
>WENV183543612
OOAO01000005
16467
Actinomycetota
GCT
Ser
>WENV183543949
OOAO01000400
235173
Actinomycetota
GGC
Ala
>WENV183543774
OOAO01000121
235173
Actinomycetota
GGC
Ala
>WENV183543598
OOAO01000002
145343
Actinomycetota
GGG
Pro
>WENV183543608
OOAO01000005
98279
Actinomycetota
GTA
Tyr
>WENV183543595
OOAO01000002
278447
Actinomycetota
GTG
His
>WENV183543950
OOAO01000400
235148
Actinomycetota
GTT
Asn
>WENV183544713
OOAO01015988
338139
Actinomycetota
GTT
Asn
>WENV183544712
OOAO01015988
338139
Actinomycetota
GTT
Asn
>WENV183543594
OOAO01000002
119485
Actinomycetota
TAA
Leu
>WENV183543620
OOAO01000009
198659
Actinomycetota
TAC
Val
>WENV183543605
OOAO01000005
113601
Actinomycetota
TAG
Leu
>WENV183544108
OOAO01000776
145423
Actinomycetota
TCT
Arg
>WENV183543610
OOAO01000005
44942
Actinomycetota
TGA
Ser
>WENV183543773
OOAO01000121
235174
Actinomycetota
TGC
Ala
>WENV183544101
OOAO01000755
144635
Actinomycetota
TGG
Pro
>WENV183544103
OOAO01000763
393408
Actinomycetota
TTC
Glu
>WENV183543720
OOAO01000085
235101
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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