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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183610902
OODS01014141
235146
Actinomycetota
CGT
Thr
>WENV183610660
OODS01003348
119475
Actinomycetota
TAA
Leu
>WENV183610969
OODS01022842
235347
Actinomycetota
GGC
Ala
>WENV183610436
OODS01000903
144589
Actinomycetota
ACG
Arg
>WENV183610744
OODS01005441
144589
Actinomycetota
ACG
Arg
>WENV183610525
OODS01001594
37070
Actinomycetota
CGA
Ser
>WENV183610644
OODS01003011
37070
Actinomycetota
CGA
Ser
>WENV183610858
OODS01010271
411601
Actinomycetota
CCC
Gly
>WENV183610128
OODS01000056
162208
Actinomycetota
TAC
Val
>WENV183610182
OODS01000111
162208
Actinomycetota
TAC
Val
>WENV183610533
OODS01001630
16219
Actinomycetota
GCT
Ser
>WENV183610632
OODS01002781
235174
Actinomycetota
TGC
Ala
>WENV183610625
OODS01002674
235174
Actinomycetota
TGC
Ala
>WENV183610646
OODS01003055
235101
Actinomycetota
TTT
Lys
>WENV183610420
OODS01000840
235101
Actinomycetota
TTT
Lys
>WENV183610369
OODS01000544
235101
Actinomycetota
TTT
Lys
>WENV183610904
OODS01014501
121510
Actinomycetota
TAA
Leu
>WENV183610427
OODS01000863
144625
Actinomycetota
GTC
Asp
>WENV183610235
OODS01000200
144625
Actinomycetota
GTC
Asp
>WENV183610233
OODS01000200
144625
Actinomycetota
GTC
Asp
>WENV183610906
OODS01014558
235199
Actinomycetota
CAC
Val
>WENV183610809
OODS01008294
254857
Actinomycetota
CCG
Arg
>WENV183610481
OODS01001242
16223
Actinomycetota
GAG
Leu
>WENV183610340
OODS01000451
144593
Actinomycetota
TAT
Ile
>WENV183610921
OODS01015843
144700
Actinomycetota
CAT
Met
>WENV183610415
OODS01000806
44942
Actinomycetota
TGA
Ser
>WENV183610977
OODS01023531
98279
Actinomycetota
GTA
Tyr
>WENV183610267
OODS01000264
338148
Actinomycetota
CTG
Gln
>WENV183610584
OODS01002164
235148
Actinomycetota
GTT
Asn
>WENV183610284
OODS01000311
235148
Actinomycetota
GTT
Asn
>WENV183610283
OODS01000311
235148
Actinomycetota
GTT
Asn
>WENV183610872
OODS01011262
176456
Actinomycetota
TCT
Arg
>WENV183610916
OODS01015215
144825
Actinomycetota
CAT
Met
>WENV183610172
OODS01000102
145347
Actinomycetota
CAA
Leu
>WENV183611076
OODS01042820
411554
Actinomycetota
CCC
Gly
>WENV183610391
OODS01000681
113601
Actinomycetota
TAG
Leu
>WENV183610611
OODS01002452
144595
Actinomycetota
CAA
Leu
>WENV183610220
OODS01000177
145343
Actinomycetota
GGG
Pro
>WENV183610455
OODS01001043
235149
Actinomycetota
CCT
Arg
>WENV183610411
OODS01000787
235149
Actinomycetota
CCT
Arg
>WENV183611096
OODS01054425
163764
Actinomycetota
TGG
Pro
>WENV183610754
OODS01005906
145269
Actinomycetota
CAT
Met
>WENV183610390
OODS01000681
235121
Actinomycetota
CGT
Thr
>WENV183610612
OODS01002452
144635
Actinomycetota
TGG
Pro
>WENV183610173
OODS01000102
144635
Actinomycetota
TGG
Pro
>WENV183610416
OODS01000814
119485
Actinomycetota
TAA
Leu
>WENV183610326
OODS01000397
80622
Actinomycetota
CAG
Leu
>WENV183610282
OODS01000306
80622
Actinomycetota
CAG
Leu
>WENV183611041
OODS01035401
158513
Actinomycetota
TGG
Pro
>WENV183610633
OODS01002781
235173
Actinomycetota
GGC
Ala
>WENV183610626
OODS01002674
235173
Actinomycetota
GGC
Ala
>WENV183610460
OODS01001087
235173
Actinomycetota
GGC
Ala
>WENV183610374
OODS01000582
235173
Actinomycetota
GGC
Ala
>WENV183611036
OODS01033930
243162
Actinomycetota
GTT
Asn
>WENV183610734
OODS01005091
278447
Actinomycetota
GTG
His
>WENV183610732
OODS01005029
278447
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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