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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183620883
OOFT01000003
236241
Actinomycetota
TAC
Val
>WENV183620880
OOFT01000003
268346
Actinomycetota
GGC
Ala
>WENV183620885
OOFT01000004
339308
Actinomycetota
CTG
Gln
>WENV183620894
OOFT01000008
192291
Actinomycetota
TTT
Lys
>WENV183620899
OOFT01000010
248046
Actinomycetota
CCA
Trp
>WENV183620901
OOFT01000013
45128
Actinomycetota
GGA
Ser
>WENV183620913
OOFT01000019
186463
Actinomycetota
GAT
Ile
>WENV183620914
OOFT01000019
245559
Actinomycetota
TGC
Ala
>WENV183620920
OOFT01000026
245899
Actinomycetota
ACG
Arg
>WENV183620940
OOFT01000255
344531
Actinomycetota
GCC
Gly
>WENV183620941
OOFT01000255
425058
Actinomycetota
GCA
Cys
>WENV183620942
OOFT01000255
344380
Actinomycetota
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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