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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183636275
OOKD01000015
287439
Alphaproteobacteria
CCA
Trp
>WENV183636308
OOKD01000027
41896
Alphaproteobacteria
CGA
Ser
>WENV183636354
OOKD01000072
300472
Alphaproteobacteria
GAA
Phe
>WENV183636436
OOKD01001193
398980
Alphaproteobacteria
GAC
Val
>WENV183636440
OOKD01001298
121655
Alphaproteobacteria
TAG
Leu
>WENV183636454
OOKD01002360
282966
Alphaproteobacteria
TTT
Lys
>WENV183636469
OOKD01004968
366782
Alphaproteobacteria
CAT
Met
>WENV183636471
OOKD01005391
29652
Alphaproteobacteria
CGA
Ser
>WENV183636473
OOKD01005648
284846
Alphaproteobacteria
CGT
Thr
>WENV183636480
OOKD01007177
401165
Alphaproteobacteria
CAC
Val
>WENV183636497
OOKD01016655
33393
Alphaproteobacteria
TGA
Ser
>WENV183636507
OOKD01023691
194696
Alphaproteobacteria
TCG
Arg
>WENV183636530
OOKD01062056
413566
Alphaproteobacteria
TTG
Gln
>WENV183636553
OOKD01141503
121738
Alphaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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