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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183672510
ORJL011175989
305403
Alphaproteobacteria
>WENV183668666
ORJL010763541
209311
Alphaproteobacteria
ACG
Arg
>WENV183668704
ORJL010765926
442504
Alphaproteobacteria
CAC
Val
>WENV183670882
ORJL010998869
442504
Alphaproteobacteria
CAC
Val
>WENV183676724
ORJL011660835
442504
Alphaproteobacteria
CAC
Val
>WENV183676728
ORJL011661947
442504
Alphaproteobacteria
CAC
Val
>WENV183668083
ORJL010710072
399239
Alphaproteobacteria
CAC
Val
>WENV183672151
ORJL011140866
399239
Alphaproteobacteria
CAC
Val
>WENV183678692
ORJL011912095
399239
Alphaproteobacteria
CAC
Val
>WENV183671559
ORJL011074885
118482
Alphaproteobacteria
CAG
Leu
>WENV183674249
ORJL011366539
118482
Alphaproteobacteria
CAG
Leu
>WENV183660645
ORJL010041747
122480
Alphaproteobacteria
CAG
Leu
>WENV183672654
ORJL011195680
210541
Alphaproteobacteria
CAT
Met
>WENV183677573
ORJL011772992
210541
Alphaproteobacteria
CAT
Met
>WENV183677576
ORJL011773387
210541
Alphaproteobacteria
CAT
Met
>WENV183676979
ORJL011694879
400028
Alphaproteobacteria
CAT
Met
>WENV183669595
ORJL010858467
180027
Alphaproteobacteria
CAT
Met
>WENV183663114
ORJL010254908
282960
Alphaproteobacteria
CCA
Trp
>WENV183664679
ORJL010398953
404712
Alphaproteobacteria
CCC
Gly
>WENV183674455
ORJL011391172
404712
Alphaproteobacteria
CCC
Gly
>WENV183676310
ORJL011608540
180026
Alphaproteobacteria
CCT
Arg
>WENV183673570
ORJL011292982
35980
Alphaproteobacteria
CGA
Ser
>WENV183670105
ORJL010908578
320067
Alphaproteobacteria
CGC
Ala
>WENV183674881
ORJL011442817
320067
Alphaproteobacteria
CGC
Ala
>WENV183662421
ORJL010191535
283559
Alphaproteobacteria
CGC
Ala
>WENV183667526
ORJL010658014
283559
Alphaproteobacteria
CGC
Ala
>WENV183671286
ORJL011043921
283559
Alphaproteobacteria
CGC
Ala
>WENV183674459
ORJL011391630
283559
Alphaproteobacteria
CGC
Ala
>WENV183675908
ORJL011565238
283559
Alphaproteobacteria
CGC
Ala
>WENV183671046
ORJL011021062
234690
Alphaproteobacteria
CGG
Pro
>WENV183677833
ORJL011803332
234690
Alphaproteobacteria
CGG
Pro
>WENV183670886
ORJL010999209
284846
Alphaproteobacteria
CGT
Thr
>WENV183660357
ORJL010016464
355084
Alphaproteobacteria
CGT
Thr
>WENV183664772
ORJL010408379
355040
Alphaproteobacteria
CTT
Lys
>WENV183665479
ORJL010465899
355040
Alphaproteobacteria
CTT
Lys
>WENV183678796
ORJL011924165
355040
Alphaproteobacteria
CTT
Lys
>WENV183663470
ORJL010287699
436046
Alphaproteobacteria
GAC
Val
>WENV183665901
ORJL010503185
436046
Alphaproteobacteria
GAC
Val
>WENV183678461
ORJL011882360
77010
Alphaproteobacteria
GAG
Leu
>WENV183668394
ORJL010736609
118146
Alphaproteobacteria
GAG
Leu
>WENV183674418
ORJL011386720
192272
Alphaproteobacteria
GAT
Ile
>WENV183662662
ORJL010214251
176633
Alphaproteobacteria
GAT
Ile
>WENV183677146
ORJL011715388
480960
Alphaproteobacteria
GCA
Cys
>WENV183677442
ORJL011759864
480900
Alphaproteobacteria
GCA
Cys
>WENV183662422
ORJL010191535
404744
Alphaproteobacteria
GCC
Gly
>WENV183665530
ORJL010471179
404744
Alphaproteobacteria
GCC
Gly
>WENV183666269
ORJL010536171
404744
Alphaproteobacteria
GCC
Gly
>WENV183669811
ORJL010880217
404744
Alphaproteobacteria
GCC
Gly
>WENV183672009
ORJL011125222
404744
Alphaproteobacteria
GCC
Gly
>WENV183676019
ORJL011579197
404744
Alphaproteobacteria
GCC
Gly
>WENV183661954
ORJL010151914
404744
Alphaproteobacteria
GCC
Gly
>WENV183676340
ORJL011611995
9363
Alphaproteobacteria
GCT
Ser
>WENV183664404
ORJL010375227
30011
Alphaproteobacteria
GGA
Ser
>WENV183674483
ORJL011394291
30011
Alphaproteobacteria
GGA
Ser
>WENV183672998
ORJL011232312
282589
Alphaproteobacteria
GGC
Ala
>WENV183665470
ORJL010465512
400223
Alphaproteobacteria
GGT
Thr
>WENV183661883
ORJL010144335
458954
Alphaproteobacteria
GGT
Thr
>WENV183677109
ORJL011711939
458954
Alphaproteobacteria
GGT
Thr
>WENV183662306
ORJL010179121
119321
Alphaproteobacteria
GTA
Tyr
>WENV183663640
ORJL010302949
119321
Alphaproteobacteria
GTA
Tyr
>WENV183669250
ORJL010822064
229804
Alphaproteobacteria
GTC
Asp
>WENV183675943
ORJL011571365
229804
Alphaproteobacteria
GTC
Asp
>WENV183670224
ORJL010922771
182475
Alphaproteobacteria
GTC
Asp
>WENV183677145
ORJL011715388
399879
Alphaproteobacteria
GTT
Asn
>WENV183673979
ORJL011336382
375285
Alphaproteobacteria
TAC
Val
>WENV183675227
ORJL011486452
375285
Alphaproteobacteria
TAC
Val
>WENV183661842
ORJL010141280
448325
Alphaproteobacteria
TAC
Val
>WENV183664175
ORJL010351204
304844
Alphaproteobacteria
TAC
Val
>WENV183666593
ORJL010566512
118145
Alphaproteobacteria
TAG
Leu
>WENV183660759
ORJL010050639
119320
Alphaproteobacteria
TAG
Leu
>WENV183660860
ORJL010061744
33393
Alphaproteobacteria
TGA
Ser
>WENV183669313
ORJL010828519
33393
Alphaproteobacteria
TGA
Ser
>WENV183664119
ORJL010345596
368481
Alphaproteobacteria
TGC
Ala
>WENV183678949
ORJL011942992
352375
Alphaproteobacteria
TGC
Ala
>WENV183663746
ORJL010312603
178252
Alphaproteobacteria
TGG
Pro
>WENV183666113
ORJL010521968
284686
Alphaproteobacteria
TTC
Glu
>WENV183673249
ORJL011259383
284686
Alphaproteobacteria
TTC
Glu
>WENV183662675
ORJL010215438
413566
Alphaproteobacteria
TTG
Gln
>WENV183660238
ORJL010007737
406803
Alphaproteobacteria
TTG
Gln
>WENV183672785
ORJL011208644
406803
Alphaproteobacteria
TTG
Gln
>WENV183676606
ORJL011646477
406803
Alphaproteobacteria
TTG
Gln
>WENV183663945
ORJL010328951
401850
Alphaproteobacteria
TTG
Gln
>WENV183661799
ORJL010137428
460338
Alphaproteobacteria
TTG
Gln
>WENV183673701
ORJL011308924
282966
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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