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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
89 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183695300
ORMF012369340
77010
Alphaproteobacteria
GAG
Leu
>WENV183684275
ORMF010686600
296698
Alphaproteobacteria
CGC
Ala
>WENV183689056
ORMF011385591
296698
Alphaproteobacteria
CGC
Ala
>WENV183691715
ORMF011806019
296698
Alphaproteobacteria
CGC
Ala
>WENV183680413
ORMF010178620
121655
Alphaproteobacteria
TAG
Leu
>WENV183687090
ORMF011094386
208947
Alphaproteobacteria
CAT
Met
>WENV183687837
ORMF011197666
334086
Alphaproteobacteria
GGC
Ala
>WENV183687838
ORMF011197666
334086
Alphaproteobacteria
GGC
Ala
>WENV183694470
ORMF012239391
334086
Alphaproteobacteria
GGC
Ala
>WENV183694471
ORMF012239391
334086
Alphaproteobacteria
GGC
Ala
>WENV183695546
ORMF012407484
192272
Alphaproteobacteria
GAT
Ile
>WENV183688672
ORMF011323199
320067
Alphaproteobacteria
CGC
Ala
>WENV183685697
ORMF010886468
184697
Alphaproteobacteria
GTC
Asp
>WENV183679606
ORMF010084611
406803
Alphaproteobacteria
TTG
Gln
>WENV183680773
ORMF010220986
406803
Alphaproteobacteria
TTG
Gln
>WENV183682569
ORMF010460422
406803
Alphaproteobacteria
TTG
Gln
>WENV183684074
ORMF010658560
406803
Alphaproteobacteria
TTG
Gln
>WENV183687285
ORMF011123513
406803
Alphaproteobacteria
TTG
Gln
>WENV183691208
ORMF011722278
406803
Alphaproteobacteria
TTG
Gln
>WENV183692222
ORMF011881897
406803
Alphaproteobacteria
TTG
Gln
>WENV183694474
ORMF012239835
406803
Alphaproteobacteria
TTG
Gln
>WENV183682235
ORMF010414199
375285
Alphaproteobacteria
TAC
Val
>WENV183686592
ORMF011025977
375285
Alphaproteobacteria
TAC
Val
>WENV183689347
ORMF011425811
375285
Alphaproteobacteria
TAC
Val
>WENV183689348
ORMF011425826
375285
Alphaproteobacteria
TAC
Val
>WENV183692696
ORMF011961819
375285
Alphaproteobacteria
TAC
Val
>WENV183696286
ORMF012533457
375285
Alphaproteobacteria
TAC
Val
>WENV183685848
ORMF010911014
282589
Alphaproteobacteria
GGC
Ala
>WENV183684453
ORMF010713381
201940
Alphaproteobacteria
CAT
Met
>WENV183687862
ORMF011200706
191064
Alphaproteobacteria
CCG
Arg
>WENV183679793
ORMF010105126
284846
Alphaproteobacteria
CGT
Thr
>WENV183681312
ORMF010287892
284846
Alphaproteobacteria
CGT
Thr
>WENV183681705
ORMF010347858
284846
Alphaproteobacteria
CGT
Thr
>WENV183686451
ORMF011003070
284846
Alphaproteobacteria
CGT
Thr
>WENV183686821
ORMF011056610
284846
Alphaproteobacteria
CGT
Thr
>WENV183687145
ORMF011103242
284846
Alphaproteobacteria
CGT
Thr
>WENV183687854
ORMF011199723
284846
Alphaproteobacteria
CGT
Thr
>WENV183685015
ORMF010789929
401850
Alphaproteobacteria
TTG
Gln
>WENV183693757
ORMF012132620
401850
Alphaproteobacteria
TTG
Gln
>WENV183684916
ORMF010774510
355084
Alphaproteobacteria
CGT
Thr
>WENV183683539
ORMF010587101
234690
Alphaproteobacteria
CGG
Pro
>WENV183686452
ORMF011003216
304844
Alphaproteobacteria
TAC
Val
>WENV183687596
ORMF011166823
97838
Alphaproteobacteria
GAG
Leu
>WENV183687792
ORMF011191590
97838
Alphaproteobacteria
GAG
Leu
>WENV183681762
ORMF010355302
287439
Alphaproteobacteria
CCA
Trp
>WENV183681407
ORMF010301777
196701
Alphaproteobacteria
TGG
Pro
>WENV183686460
ORMF011005289
196701
Alphaproteobacteria
TGG
Pro
>WENV183688304
ORMF011272131
196701
Alphaproteobacteria
TGG
Pro
>WENV183686229
ORMF010967445
436046
Alphaproteobacteria
GAC
Val
>WENV183688911
ORMF011362057
436046
Alphaproteobacteria
GAC
Val
>WENV183690270
ORMF011570162
436046
Alphaproteobacteria
GAC
Val
>WENV183691901
ORMF011837147
436046
Alphaproteobacteria
GAC
Val
>WENV183695166
ORMF012346908
73986
Alphaproteobacteria
CAG
Leu
>WENV183692998
ORMF012004974
210541
Alphaproteobacteria
CAT
Met
>WENV183681428
ORMF010306475
404744
Alphaproteobacteria
GCC
Gly
>WENV183682182
ORMF010407531
404744
Alphaproteobacteria
GCC
Gly
>WENV183691967
ORMF011843943
400250
Alphaproteobacteria
GAC
Val
>WENV183683073
ORMF010524953
282872
Alphaproteobacteria
CCA
Trp
>WENV183686337
ORMF010985873
480960
Alphaproteobacteria
GCA
Cys
>WENV183687522
ORMF011158664
9363
Alphaproteobacteria
GCT
Ser
>WENV183692866
ORMF011986371
192275
Alphaproteobacteria
GTG
His
>WENV183679755
ORMF010101306
182475
Alphaproteobacteria
GTC
Asp
>WENV183696504
ORMF012566061
182475
Alphaproteobacteria
GTC
Asp
>WENV183692999
ORMF012004995
122480
Alphaproteobacteria
CAG
Leu
>WENV183687192
ORMF011110490
119321
Alphaproteobacteria
GTA
Tyr
>WENV183691081
ORMF011700635
515573
Alphaproteobacteria
CCC
Gly
>WENV183691334
ORMF011743205
515573
Alphaproteobacteria
CCC
Gly
>WENV183691843
ORMF011828529
515573
Alphaproteobacteria
CCC
Gly
>WENV183696412
ORMF012550449
30011
Alphaproteobacteria
GGA
Ser
>WENV183680638
ORMF010206513
399210
Alphaproteobacteria
CAT
Met
>WENV183689427
ORMF011437593
228484
Alphaproteobacteria
CCG
Arg
>WENV183687984
ORMF011217286
458954
Alphaproteobacteria
GGT
Thr
>WENV183680724
ORMF010215835
176633
Alphaproteobacteria
GAT
Ile
>WENV183681284
ORMF010284114
176633
Alphaproteobacteria
GAT
Ile
>WENV183686441
ORMF011001748
176633
Alphaproteobacteria
GAT
Ile
>WENV183684297
ORMF010690563
480900
Alphaproteobacteria
GCA
Cys
>WENV183693528
ORMF012095059
398996
Alphaproteobacteria
GCC
Gly
>WENV183679241
ORMF010033906
284686
Alphaproteobacteria
TTC
Glu
>WENV183680985
ORMF010247332
284686
Alphaproteobacteria
TTC
Glu
>WENV183690101
ORMF011544399
284686
Alphaproteobacteria
TTC
Glu
>WENV183691566
ORMF011783205
284686
Alphaproteobacteria
TTC
Glu
>WENV183691781
ORMF011817645
284686
Alphaproteobacteria
TTC
Glu
>WENV183692723
ORMF011965574
284686
Alphaproteobacteria
TTC
Glu
>WENV183681270
ORMF010282244
403890
Alphaproteobacteria
GAC
Val
>WENV183695409
ORMF012386875
403890
Alphaproteobacteria
GAC
Val
>WENV183685325
ORMF010831585
29743
Alphaproteobacteria
CGA
Ser
>WENV183694442
ORMF012234043
119320
Alphaproteobacteria
TAG
Leu
>WENV183680659
ORMF010208991
352375
Alphaproteobacteria
TGC
Ala
>WENV183684816
ORMF010760579
352375
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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