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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
103 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183739713
PJUF01000001
304816
Alphaproteobacteria
CGT
Thr
>WENV183739714
PJUF01000001
200110
Alphaproteobacteria
ACG
Arg
>WENV183739715
PJUF01000002
282748
Alphaproteobacteria
CGT
Thr
>WENV183739716
PJUF01000002
400945
Alphaproteobacteria
GCC
Gly
>WENV183739725
PJUF01000003
480900
Alphaproteobacteria
GCA
Cys
>WENV183739734
PJUF01000004
285028
Alphaproteobacteria
CTT
Lys
>WENV183739744
PJUF01000005
233665
Alphaproteobacteria
CCT
Arg
>WENV183739746
PJUF01000005
283320
Alphaproteobacteria
>WENV183739747
PJUF01000005
399340
Alphaproteobacteria
GTT
Asn
>WENV183739749
PJUF01000005
282749
Alphaproteobacteria
CGC
Ala
>WENV183739757
PJUF01000006
178576
Alphaproteobacteria
ACG
Arg
>WENV183739774
PJUF01000008
141969
Alphaproteobacteria
GTA
Tyr
>WENV183739775
PJUF01000008
482973
Alphaproteobacteria
TCC
Gly
>WENV183739780
PJUF01000009
284697
Alphaproteobacteria
GAA
Phe
>WENV183739789
PJUF01000012
480946
Alphaproteobacteria
TTG
Gln
>WENV183739801
PJUF01000017
106524
Alphaproteobacteria
GTA
Tyr
>WENV183739802
PJUF01000017
77010
Alphaproteobacteria
GAG
Leu
>WENV183739829
PJUF01000025
178731
Alphaproteobacteria
GTC
Asp
>WENV183739859
PJUF01000031
178731
Alphaproteobacteria
GTC
Asp
>WENV183739900
PJUF01000055
400258
Alphaproteobacteria
>WENV183739914
PJUF01000068
304844
Alphaproteobacteria
TAC
Val
>WENV183739939
PJUF01000084
282749
Alphaproteobacteria
CGC
Ala
>WENV183739985
PJUF01000114
191064
Alphaproteobacteria
CCG
Arg
>WENV183740035
PJUF01000171
282749
Alphaproteobacteria
CGC
Ala
>WENV183740037
PJUF01000178
400188
Alphaproteobacteria
CCC
Gly
>WENV183740047
PJUF01000196
285028
Alphaproteobacteria
CTT
Lys
>WENV183740048
PJUF01000197
282748
Alphaproteobacteria
CGT
Thr
>WENV183740062
PJUF01000255
178197
Alphaproteobacteria
CAT
Met
>WENV183740063
PJUF01000255
427571
Alphaproteobacteria
GCC
Gly
>WENV183740102
PJUF01000337
282924
Alphaproteobacteria
CGC
Ala
>WENV183740103
PJUF01000346
304844
Alphaproteobacteria
TAC
Val
>WENV183740155
PJUF01000502
480946
Alphaproteobacteria
TTG
Gln
>WENV183740165
PJUF01000561
458954
Alphaproteobacteria
GGT
Thr
>WENV183740168
PJUF01000570
209657
Alphaproteobacteria
TAC
Val
>WENV183740171
PJUF01000583
400186
Alphaproteobacteria
GTT
Asn
>WENV183740175
PJUF01000594
29652
Alphaproteobacteria
CGA
Ser
>WENV183740188
PJUF01000663
118136
Alphaproteobacteria
CAA
Leu
>WENV183740255
PJUF01000852
13311
Alphaproteobacteria
GCT
Ser
>WENV183740284
PJUF01001005
29645
Alphaproteobacteria
CGA
Ser
>WENV183740285
PJUF01001011
402731
Alphaproteobacteria
TTG
Gln
>WENV183740310
PJUF01001103
78800
Alphaproteobacteria
CAG
Leu
>WENV183740319
PJUF01001156
282923
Alphaproteobacteria
CTT
Lys
>WENV183740320
PJUF01001167
400190
Alphaproteobacteria
>WENV183740322
PJUF01001173
282966
Alphaproteobacteria
TTT
Lys
>WENV183740334
PJUF01001224
400945
Alphaproteobacteria
GCC
Gly
>WENV183740361
PJUF01001424
301758
Alphaproteobacteria
GAA
Phe
>WENV183740363
PJUF01001429
480958
Alphaproteobacteria
CTG
Gln
>WENV183740418
PJUF01001816
178198
Alphaproteobacteria
TTT
Lys
>WENV183740454
PJUF01002329
401165
Alphaproteobacteria
CAC
Val
>WENV183740455
PJUF01002332
118550
Alphaproteobacteria
GAG
Leu
>WENV183740465
PJUF01002390
482902
Alphaproteobacteria
TCC
Gly
>WENV183740495
PJUF01002738
180027
Alphaproteobacteria
CAT
Met
>WENV183740501
PJUF01002829
186414
Alphaproteobacteria
CAT
Met
>WENV183740546
PJUF01003322
178252
Alphaproteobacteria
TGG
Pro
>WENV183740566
PJUF01003572
195199
Alphaproteobacteria
GTC
Asp
>WENV183740577
PJUF01003620
77010
Alphaproteobacteria
GAG
Leu
>WENV183740594
PJUF01003967
515573
Alphaproteobacteria
CCC
Gly
>WENV183740608
PJUF01004376
355084
Alphaproteobacteria
CGT
Thr
>WENV183740655
PJUF01005460
188085
Alphaproteobacteria
GTC
Asp
>WENV183740656
PJUF01005503
121655
Alphaproteobacteria
TAG
Leu
>WENV183740680
PJUF01006269
194696
Alphaproteobacteria
TCG
Arg
>WENV183740700
PJUF01006714
42113
Alphaproteobacteria
TGA
Ser
>WENV183740706
PJUF01007153
25643
Alphaproteobacteria
GGA
Ser
>WENV183740738
PJUF01008177
287439
Alphaproteobacteria
CCA
Trp
>WENV183740766
PJUF01009308
480900
Alphaproteobacteria
GCA
Cys
>WENV183740790
PJUF01010357
352375
Alphaproteobacteria
TGC
Ala
>WENV183740811
PJUF01011445
281409
Alphaproteobacteria
TTT
Lys
>WENV183740836
PJUF01012757
315952
Alphaproteobacteria
GAA
Phe
>WENV183740891
PJUF01015879
399340
Alphaproteobacteria
GTT
Asn
>WENV183740900
PJUF01016591
184444
Alphaproteobacteria
GTG
His
>WENV183740940
PJUF01019747
185194
Alphaproteobacteria
TCT
Arg
>WENV183740951
PJUF01020772
282960
Alphaproteobacteria
CCA
Trp
>WENV183740959
PJUF01021961
469211
Alphaproteobacteria
>WENV183741033
PJUF01030337
73523
Alphaproteobacteria
CAG
Leu
>WENV183741040
PJUF01030765
283022
Alphaproteobacteria
CTT
Lys
>WENV183741051
PJUF01032283
118100
Alphaproteobacteria
GTA
Tyr
>WENV183741053
PJUF01032342
20388
Alphaproteobacteria
GCT
Ser
>WENV183741063
PJUF01033753
117819
Alphaproteobacteria
TAG
Leu
>WENV183741064
PJUF01034034
176490
Alphaproteobacteria
CAT
Met
>WENV183741067
PJUF01034648
195445
Alphaproteobacteria
CAT
Met
>WENV183741080
PJUF01036632
29784
Alphaproteobacteria
TGA
Ser
>WENV183741130
PJUF01044361
304844
Alphaproteobacteria
TAC
Val
>WENV183741145
PJUF01046958
360947
Alphaproteobacteria
TTT
Lys
>WENV183741196
PJUF01054429
75222
Alphaproteobacteria
GAG
Leu
>WENV183741204
PJUF01056060
404182
Alphaproteobacteria
CAC
Val
>WENV183741207
PJUF01056449
176230
Alphaproteobacteria
CGG
Pro
>WENV183741215
PJUF01058422
176233
Alphaproteobacteria
>WENV183741221
PJUF01060319
184517
Alphaproteobacteria
GGG
Pro
>WENV183741222
PJUF01060416
180177
Alphaproteobacteria
CCT
Arg
>WENV183741231
PJUF01061742
178576
Alphaproteobacteria
ACG
Arg
>WENV183741244
PJUF01064797
30671
Alphaproteobacteria
GGA
Ser
>WENV183741249
PJUF01066933
400249
Alphaproteobacteria
GCC
Gly
>WENV183741255
PJUF01068748
184517
Alphaproteobacteria
GGG
Pro
>WENV183741259
PJUF01070031
283066
Alphaproteobacteria
CAT
Met
>WENV183741262
PJUF01070680
176225
Alphaproteobacteria
TGG
Pro
>WENV183741271
PJUF01072704
398980
Alphaproteobacteria
GAC
Val
>WENV183741278
PJUF01073147
400249
Alphaproteobacteria
GCC
Gly
>WENV183741284
PJUF01074189
178731
Alphaproteobacteria
GTC
Asp
>WENV183741285
PJUF01074189
178731
Alphaproteobacteria
GTC
Asp
>WENV183741288
PJUF01074983
118387
Alphaproteobacteria
CAA
Leu
>WENV183741313
PJUF01083960
29666
Alphaproteobacteria
CGA
Ser
>WENV183741315
PJUF01084056
184517
Alphaproteobacteria
GGG
Pro
>WENV183741333
PJUF01087258
509917
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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