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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183569831
OOCC01001221
196621
Bacillota
GTC
Asp
>WENV183569889
OOCC01003296
196621
Bacillota
GTC
Asp
>WENV183569994
OOCC01015173
196621
Bacillota
GTC
Asp
>WENV183569809
OOCC01000780
144612
Bacillota
TCT
Arg
>WENV183569841
OOCC01001399
235098
Bacillota
GAC
Val
>WENV183569863
OOCC01002119
235098
Bacillota
GAC
Val
>WENV183570026
OOCC01022147
235098
Bacillota
GAC
Val
>WENV183569825
OOCC01001174
340263
Bacillota
TTC
Glu
>WENV183570009
OOCC01016622
340263
Bacillota
TTC
Glu
>WENV183569796
OOCC01000515
44854
Bacillota
TGA
Ser
>WENV183569827
OOCC01001174
148348
Bacillota
GTC
Asp
>WENV183569929
OOCC01005681
144577
Bacillota
GAT
Ile
>WENV183569992
OOCC01015173
304022
Bacillota
GCC
Gly
>WENV183569869
OOCC01002410
304022
Bacillota
GCC
Gly
>WENV183569832
OOCC01001221
304022
Bacillota
GCC
Gly
>WENV183569780
OOCC01000346
11034
Bacillota
GGA
Ser
>WENV183569779
OOCC01000346
11034
Bacillota
GGA
Ser
>WENV183569993
OOCC01015173
235117
Bacillota
TAC
Val
>WENV183569828
OOCC01001174
239076
Bacillota
GAA
Phe
>WENV183569883
OOCC01002902
235697
Bacillota
GTT
Asn
>WENV183569868
OOCC01002410
235079
Bacillota
GAA
Phe
>WENV183569888
OOCC01003032
340265
Bacillota
GCC
Gly
>WENV183569928
OOCC01005681
235087
Bacillota
TGC
Ala
>WENV183569983
OOCC01013517
338149
Bacillota
CTC
Glu
>WENV183569817
OOCC01000936
338149
Bacillota
CTC
Glu
>WENV183569961
OOCC01009581
245298
Bacillota
CGG
Pro
>WENV183569776
OOCC01000326
411547
Bacillota
CTG
Gln
>WENV183569797
OOCC01000515
4624
Bacillota
GCT
Ser
>WENV183569890
OOCC01003296
235095
Bacillota
GGT
Thr
>WENV183570044
OOCC01028914
152151
Bacillota
TCT
Arg
>WENV183569826
OOCC01001174
239079
Bacillota
TAC
Val
>WENV183569829
OOCC01001174
304759
Bacillota
TAC
Val
>WENV183569814
OOCC01000865
411549
Bacillota
TTG
Gln
>WENV183569965
OOCC01010208
148188
Bacillota
CCG
Arg
>WENV183569948
OOCC01008791
80612
Bacillota
GTA
Tyr
>WENV183569943
OOCC01007566
235124
Bacillota
TGG
Pro
>WENV183569931
OOCC01006225
235124
Bacillota
TGG
Pro
>WENV183569864
OOCC01002241
235124
Bacillota
TGG
Pro
>WENV183569936
OOCC01006624
338129
Bacillota
TGT
Thr
>WENV183570042
OOCC01026792
144583
Bacillota
ACG
Arg
>WENV183569882
OOCC01002876
144583
Bacillota
ACG
Arg
>WENV183569923
OOCC01005388
235171
Bacillota
CCA
Trp
>WENV183569976
OOCC01012008
144621
Bacillota
GTT
Asn
>WENV183569795
OOCC01000509
144621
Bacillota
GTT
Asn
>WENV183569789
OOCC01000413
58712
Bacillota
CAG
Leu
>WENV183569812
OOCC01000812
245296
Bacillota
CCC
Gly
>WENV183569824
OOCC01001174
239078
Bacillota
TTT
Lys
>WENV183570024
OOCC01021657
196632
Bacillota
GTC
Asp
>WENV183569840
OOCC01001389
144594
Bacillota
CAC
Val
>WENV183569794
OOCC01000450
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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