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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183644935
OQVQ01000208
163943
Bacillota
GTC
Asp
>WENV183644985
OQVQ01000396
347851
Bacillota
TTC
Glu
>WENV183644994
OQVQ01000406
148348
Bacillota
GTC
Asp
>WENV183644995
OQVQ01000406
239076
Bacillota
GAA
Phe
>WENV183645060
OQVQ01000740
238910
Bacillota
CTT
Lys
>WENV183645124
OQVQ01001154
16595
Bacillota
GCT
Ser
>WENV183645145
OQVQ01001257
352996
Bacillota
TTC
Glu
>WENV183645163
OQVQ01001326
338128
Bacillota
TTC
Glu
>WENV183645175
OQVQ01001452
127572
Bacillota
ACG
Arg
>WENV183645183
OQVQ01001504
243098
Bacillota
GGT
Thr
>WENV183645187
OQVQ01001544
154063
Bacillota
CGG
Pro
>WENV183645248
OQVQ01002407
338129
Bacillota
TGT
Thr
>WENV183645282
OQVQ01002879
341796
Bacillota
CCG
Arg
>WENV183645301
OQVQ01003276
148188
Bacillota
CCG
Arg
>WENV183645325
OQVQ01004042
344240
Bacillota
GCC
Gly
>WENV183645339
OQVQ01004264
241471
Bacillota
TGC
Ala
>WENV183645354
OQVQ01004514
248683
Bacillota
TTT
Lys
>WENV183645374
OQVQ01005111
147684
Bacillota
ACG
Arg
>WENV183645398
OQVQ01005559
419877
Bacillota
TCC
Gly
>WENV183645414
OQVQ01006244
44859
Bacillota
AAG
Leu
>WENV183645453
OQVQ01007395
235150
Bacillota
TGC
Ala
>WENV183645464
OQVQ01008031
413152
Bacillota
TCC
Gly
>WENV183645477
OQVQ01008505
156937
Bacillota
GTG
His
>WENV183645485
OQVQ01008691
153911
Bacillota
GAT
Ile
>WENV183645493
OQVQ01008910
338149
Bacillota
CTC
Glu
>WENV183645494
OQVQ01008910
235091
Bacillota
CTT
Lys
>WENV183645530
OQVQ01010472
235095
Bacillota
GGT
Thr
>WENV183645619
OQVQ01014337
37437
Bacillota
TAA
Leu
>WENV183645621
OQVQ01014337
84171
Bacillota
GAG
Leu
>WENV183645640
OQVQ01015473
144583
Bacillota
ACG
Arg
>WENV183645647
OQVQ01015715
238945
Bacillota
GCC
Gly
>WENV183645689
OQVQ01019311
247734
Bacillota
TGC
Ala
>WENV183645716
OQVQ01021570
235098
Bacillota
GAC
Val
>WENV183645759
OQVQ01024565
44854
Bacillota
TGA
Ser
>WENV183645760
OQVQ01024565
4624
Bacillota
GCT
Ser
>WENV183645834
OQVQ01032171
412387
Bacillota
GCA
Cys
>WENV183645835
OQVQ01032675
37269
Bacillota
TGA
Ser
>WENV183645850
OQVQ01033831
152149
Bacillota
GTG
His
>WENV183645876
OQVQ01038128
144610
Bacillota
GTG
His
>WENV183645884
OQVQ01039087
11034
Bacillota
GGA
Ser
>WENV183645886
OQVQ01039237
236037
Bacillota
GTG
His
>WENV183645896
OQVQ01040536
248965
Bacillota
GCC
Gly
>WENV183645900
OQVQ01041168
235087
Bacillota
TGC
Ala
>WENV183645949
OQVQ01048875
59312
Bacillota
CAG
Leu
>WENV183645952
OQVQ01049151
237963
Bacillota
TTT
Lys
>WENV183645961
OQVQ01051178
235171
Bacillota
CCA
Trp
>WENV183646007
OQVQ01060734
44859
Bacillota
AAG
Leu
>WENV183646014
OQVQ01062121
237846
Bacillota
GCC
Gly
>WENV183646019
OQVQ01063664
411547
Bacillota
CTG
Gln
>WENV183646020
OQVQ01063664
245298
Bacillota
CGG
Pro
>WENV183646030
OQVQ01065500
338410
Bacillota
TTC
Glu
>WENV183646034
OQVQ01065946
256380
Bacillota
>WENV183646038
OQVQ01066526
144621
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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