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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
109 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183647224
OQVS01000099
184539
Bacillota
TCT
Arg
>WENV183647225
OQVS01000099
186123
Bacillota
GTC
Asp
>WENV183647226
OQVS01000099
405393
Bacillota
GCC
Gly
>WENV183647277
OQVS01000199
409321
Bacillota
TTC
Glu
>WENV183647372
OQVS01000478
342104
Bacillota
TAC
Val
>WENV183647444
OQVS01000718
402739
Bacillota
CCG
Arg
>WENV183647446
OQVS01000727
288708
Bacillota
CAT
Met
>WENV183647451
OQVS01000750
280492
Bacillota
CTT
Lys
>WENV183647501
OQVS01000974
346451
Bacillota
TTT
Lys
>WENV183647534
OQVS01001145
281445
Bacillota
GTG
His
>WENV183647576
OQVS01001373
117745
Bacillota
GTA
Tyr
>WENV183647605
OQVS01001555
285756
Bacillota
GCC
Gly
>WENV183647630
OQVS01001691
175857
Bacillota
GTG
His
>WENV183647632
OQVS01001691
280463
Bacillota
TTT
Lys
>WENV183647633
OQVS01001696
215243
Bacillota
CAT
Met
>WENV183647684
OQVS01001998
184539
Bacillota
TCT
Arg
>WENV183647729
OQVS01002258
280492
Bacillota
CTT
Lys
>WENV183647777
OQVS01002604
175859
Bacillota
TCT
Arg
>WENV183647785
OQVS01002679
179917
Bacillota
CAT
Met
>WENV183647795
OQVS01002807
175831
Bacillota
ACG
Arg
>WENV183647796
OQVS01002832
280473
Bacillota
TGG
Pro
>WENV183647802
OQVS01002963
322848
Bacillota
CTT
Lys
>WENV183647817
OQVS01003127
398852
Bacillota
CTC
Glu
>WENV183647819
OQVS01003135
175859
Bacillota
TCT
Arg
>WENV183647860
OQVS01003603
398852
Bacillota
CTC
Glu
>WENV183647871
OQVS01003706
480322
Bacillota
CTG
Gln
>WENV183647876
OQVS01003779
398852
Bacillota
CTC
Glu
>WENV183647883
OQVS01003844
186123
Bacillota
GTC
Asp
>WENV183647884
OQVS01003844
405393
Bacillota
GCC
Gly
>WENV183647930
OQVS01004460
73009
Bacillota
CAG
Leu
>WENV183647960
OQVS01004892
346451
Bacillota
TTT
Lys
>WENV183647972
OQVS01005089
175868
Bacillota
GTT
Asn
>WENV183647982
OQVS01005209
99852
Bacillota
GTA
Tyr
>WENV183647984
OQVS01005225
46643
Bacillota
TGA
Ser
>WENV183647985
OQVS01005227
73009
Bacillota
CAG
Leu
>WENV183647991
OQVS01005353
280473
Bacillota
TGG
Pro
>WENV183647998
OQVS01005422
480322
Bacillota
CTG
Gln
>WENV183647999
OQVS01005422
291581
Bacillota
CGG
Pro
>WENV183648005
OQVS01005493
73664
Bacillota
CAG
Leu
>WENV183648011
OQVS01005585
405393
Bacillota
GCC
Gly
>WENV183648022
OQVS01005776
405393
Bacillota
GCC
Gly
>WENV183648083
OQVS01006516
480324
Bacillota
TTG
Gln
>WENV183648086
OQVS01006568
82124
Bacillota
TAA
Leu
>WENV183648102
OQVS01006905
179810
Bacillota
TCT
Arg
>WENV183648103
OQVS01006905
229015
Bacillota
GTG
His
>WENV183648104
OQVS01007023
480324
Bacillota
TTG
Gln
>WENV183648149
OQVS01007735
280428
Bacillota
GAA
Phe
>WENV183648155
OQVS01007915
73009
Bacillota
CAG
Leu
>WENV183648164
OQVS01008002
480324
Bacillota
TTG
Gln
>WENV183648168
OQVS01008063
280473
Bacillota
TGG
Pro
>WENV183648191
OQVS01008361
175868
Bacillota
GTT
Asn
>WENV183648205
OQVS01008815
280473
Bacillota
TGG
Pro
>WENV183648211
OQVS01009050
398854
Bacillota
CTC
Glu
>WENV183648212
OQVS01009050
175868
Bacillota
GTT
Asn
>WENV183648214
OQVS01009098
280447
Bacillota
GAC
Val
>WENV183648239
OQVS01009381
280444
Bacillota
GGT
Thr
>WENV183648262
OQVS01009810
175842
Bacillota
CAC
Val
>WENV183648296
OQVS01010835
280447
Bacillota
GAC
Val
>WENV183648303
OQVS01011186
338033
Bacillota
GAA
Phe
>WENV183648308
OQVS01011186
110240
Bacillota
GAG
Leu
>WENV183648312
OQVS01011317
483485
Bacillota
CCC
Gly
>WENV183648322
OQVS01011970
179755
Bacillota
CCG
Arg
>WENV183648335
OQVS01012629
73009
Bacillota
CAG
Leu
>WENV183648345
OQVS01012956
56074
Bacillota
TGA
Ser
>WENV183648346
OQVS01012956
5692
Bacillota
GCT
Ser
>WENV183648367
OQVS01013687
295166
Bacillota
TGC
Ala
>WENV183648368
OQVS01013690
56079
Bacillota
AAG
Leu
>WENV183648386
OQVS01013929
343590
Bacillota
GCC
Gly
>WENV183648387
OQVS01013957
189473
Bacillota
GAT
Ile
>WENV183648414
OQVS01014695
56074
Bacillota
TGA
Ser
>WENV183648415
OQVS01014695
5692
Bacillota
GCT
Ser
>WENV183648443
OQVS01015636
190476
Bacillota
CAT
Met
>WENV183648444
OQVS01015636
398832
Bacillota
TTC
Glu
>WENV183648456
OQVS01016227
289123
Bacillota
GGT
Thr
>WENV183648458
OQVS01016266
175842
Bacillota
CAC
Val
>WENV183648462
OQVS01016387
179755
Bacillota
CCG
Arg
>WENV183648489
OQVS01017315
481217
Bacillota
GCA
Cys
>WENV183648493
OQVS01017513
99852
Bacillota
GTA
Tyr
>WENV183648502
OQVS01017954
280473
Bacillota
TGG
Pro
>WENV183648513
OQVS01018403
56074
Bacillota
TGA
Ser
>WENV183648514
OQVS01018403
5692
Bacillota
GCT
Ser
>WENV183648523
OQVS01018551
280428
Bacillota
GAA
Phe
>WENV183648524
OQVS01018551
349107
Bacillota
GCC
Gly
>WENV183648525
OQVS01018831
56074
Bacillota
TGA
Ser
>WENV183648526
OQVS01018831
5692
Bacillota
GCT
Ser
>WENV183648536
OQVS01019058
353153
Bacillota
TGC
Ala
>WENV183648537
OQVS01019058
179563
Bacillota
GAT
Ile
>WENV183648552
OQVS01019509
317820
Bacillota
TAC
Val
>WENV183648560
OQVS01019862
175842
Bacillota
CAC
Val
>WENV183648567
OQVS01019979
480324
Bacillota
TTG
Gln
>WENV183648586
OQVS01020919
280473
Bacillota
TGG
Pro
>WENV183648594
OQVS01021258
175849
Bacillota
GTC
Asp
>WENV183648595
OQVS01021258
280444
Bacillota
GGT
Thr
>WENV183648619
OQVS01022419
175831
Bacillota
ACG
Arg
>WENV183648625
OQVS01022546
291581
Bacillota
CGG
Pro
>WENV183648626
OQVS01022560
480324
Bacillota
TTG
Gln
>WENV183648668
OQVS01025556
291576
Bacillota
CCC
Gly
>WENV183648735
OQVS01031852
398833
Bacillota
TGT
Thr
>WENV183648788
OQVS01038021
405363
Bacillota
GCA
Cys
>WENV183648835
OQVS01044875
280427
Bacillota
TAC
Val
>WENV183648868
OQVS01050171
303718
Bacillota
TGT
Thr
>WENV183648878
OQVS01051368
235661
Bacillota
GTC
Asp
>WENV183648884
OQVS01051836
58120
Bacillota
AAG
Leu
>WENV183648967
OQVS01067658
298260
Bacillota
GTT
Asn
>WENV183649023
OQVS01082166
426579
Bacillota
GTT
Asn
>WENV183649034
OQVS01085649
175825
Bacillota
GAT
Ile
>WENV183649079
OQVS01098720
186051
Bacillota
GAT
Ile
>WENV183649127
OQVS01112855
409321
Bacillota
TTC
Glu
>WENV183649175
OQVS01128028
444984
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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