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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183722943
PDYJ01000003
204381
Bacillota
GAT
Ile
>WENV183722945
PDYJ01000003
204381
Bacillota
GAT
Ile
>WENV183722947
PDYJ01000003
285601
Bacillota
TTC
Glu
>WENV183722997
PDYJ01000008
332864
Bacillota
CTT
Lys
>WENV183723014
PDYJ01000024
56397
Bacillota
CAA
Leu
>WENV183723006
PDYJ01000024
407852
Bacillota
TTC
Glu
>WENV183723013
PDYJ01000024
501142
Bacillota
GCA
Cys
>WENV183723007
PDYJ01000024
282730
Bacillota
TAC
Val
>WENV183723011
PDYJ01000024
301839
Bacillota
GTG
His
>WENV183723010
PDYJ01000024
480918
Bacillota
>WENV183723008
PDYJ01000024
330582
Bacillota
GTC
Asp
>WENV183723009
PDYJ01000024
105208
Bacillota
GTA
Tyr
>WENV183723047
PDYJ01000072
118683
Bacillota
GTA
Tyr
>WENV183723043
PDYJ01000072
400140
Bacillota
TTC
Glu
>WENV183723045
PDYJ01000072
285845
Bacillota
GTC
Asp
>WENV183723042
PDYJ01000072
8724
Bacillota
GCT
Ser
>WENV183723057
PDYJ01000098
408813
Bacillota
TCG
Arg
>WENV183723100
PDYJ01000586
285537
Bacillota
CCT
Arg
>WENV183723249
PDYJ01000822
283881
Bacillota
TGC
Ala
>WENV183723250
PDYJ01000822
282730
Bacillota
TAC
Val
>WENV183723252
PDYJ01000822
294385
Bacillota
TGT
Thr
>WENV183723255
PDYJ01000822
178962
Bacillota
ACG
Arg
>WENV183723261
PDYJ01000841
285947
Bacillota
CTG
Gln
>WENV183723262
PDYJ01000841
283493
Bacillota
CTC
Glu
>WENV183723312
PDYJ01001504
175915
Bacillota
GTC
Asp
>WENV183723426
PDYJ01001564
332864
Bacillota
CTT
Lys
>WENV183723427
PDYJ01001564
332864
Bacillota
CTT
Lys
>WENV183723496
PDYJ01001869
56397
Bacillota
CAA
Leu
>WENV183723477
PDYJ01001869
285945
Bacillota
TTT
Lys
>WENV183723492
PDYJ01001869
407852
Bacillota
TTC
Glu
>WENV183723485
PDYJ01001869
9377
Bacillota
TGA
Ser
>WENV183723476
PDYJ01001869
282730
Bacillota
TAC
Val
>WENV183723495
PDYJ01001869
301839
Bacillota
GTG
His
>WENV183723478
PDYJ01001869
294385
Bacillota
TGT
Thr
>WENV183723488
PDYJ01001869
283719
Bacillota
GAA
Phe
>WENV183723487
PDYJ01001869
330582
Bacillota
GTC
Asp
>WENV183723494
PDYJ01001869
330582
Bacillota
GTC
Asp
>WENV183723481
PDYJ01001869
178962
Bacillota
ACG
Arg
>WENV183723491
PDYJ01001869
21320
Bacillota
GCT
Ser
>WENV183723508
PDYJ01002172
20358
Bacillota
CGA
Ser
>WENV183723621
PDYJ01002317
401837
Bacillota
TTC
Glu
>WENV183723743
PDYJ01003092
329074
Bacillota
TGC
Ala
>WENV183723746
PDYJ01003092
329074
Bacillota
TGC
Ala
>WENV183723754
PDYJ01003095
118683
Bacillota
GTA
Tyr
>WENV183723750
PDYJ01003095
8724
Bacillota
GCT
Ser
>WENV183723766
PDYJ01003118
283881
Bacillota
TGC
Ala
>WENV183723787
PDYJ01003166
20358
Bacillota
CGA
Ser
>WENV183723804
PDYJ01003493
283738
Bacillota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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