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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183746759
PPCM01000005
280427
Bacillota
TAC
Val
>WENV183746813
PPCM01000013
280643
Bacillota
TTT
Lys
>WENV183746883
PPCM01000032
423320
Bacillota
>WENV183746886
PPCM01000032
424916
Bacillota
GCC
Gly
>WENV183746933
PPCM01000048
280643
Bacillota
TTT
Lys
>WENV183746968
PPCM01000074
208754
Bacillota
TGG
Pro
>WENV183747030
PPCM01000118
418607
Bacillota
TTC
Glu
>WENV183747031
PPCM01000118
179702
Bacillota
GTC
Asp
>WENV183747035
PPCM01000123
418607
Bacillota
TTC
Glu
>WENV183747036
PPCM01000123
179702
Bacillota
GTC
Asp
>WENV183747151
PPCM01000297
424916
Bacillota
GCC
Gly
>WENV183747167
PPCM01000335
424916
Bacillota
GCC
Gly
>WENV183747169
PPCM01000335
280643
Bacillota
TTT
Lys
>WENV183747255
PPCM01000572
176548
Bacillota
CAT
Met
>WENV183747284
PPCM01000702
284869
Bacillota
CCA
Trp
>WENV183747315
PPCM01000883
484479
Bacillota
GCA
Cys
>WENV183747323
PPCM01000896
208754
Bacillota
TGG
Pro
>WENV183747324
PPCM01000903
223431
Bacillota
GAT
Ile
>WENV183747346
PPCM01001040
208754
Bacillota
TGG
Pro
>WENV183747367
PPCM01001177
284476
Bacillota
TGT
Thr
>WENV183747416
PPCM01001809
423320
Bacillota
>WENV183747429
PPCM01001916
293559
Bacillota
TGC
Ala
>WENV183747501
PPCM01003604
423320
Bacillota
>WENV183747505
PPCM01003604
176016
Bacillota
CAT
Met
>WENV183747666
PPCM01015227
423320
Bacillota
>WENV183747673
PPCM01015227
423320
Bacillota
>WENV183747709
PPCM01020282
208754
Bacillota
TGG
Pro
>WENV183747754
PPCM01030137
320459
Bacillota
CAT
Met
>WENV183747755
PPCM01030137
423320
Bacillota
>WENV183747783
PPCM01037785
281271
Bacillota
TGC
Ala
>WENV183747804
PPCM01043189
317202
Bacillota
CAT
Met
>WENV183747806
PPCM01043189
423320
Bacillota
>WENV183747808
PPCM01043393
223045
Bacillota
GAT
Ile
>WENV183747811
PPCM01043532
317202
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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