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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170297939
CESF01025324
402532
Bacteroidota
GCC
Gly
>WENV170297852
CESF01014769
400818
Bacteroidota
TTC
Glu
>WENV170298390
CESF01109155
400818
Bacteroidota
TTC
Glu
>WENV170297940
CESF01025324
78246
Bacteroidota
TAA
Leu
>WENV170298651
CESF01161513
402390
Bacteroidota
TTC
Glu
>WENV170298455
CESF01121124
198599
Bacteroidota
GTG
His
>WENV170297941
CESF01025324
281190
Bacteroidota
CAT
Met
>WENV170298549
CESF01136296
281190
Bacteroidota
CAT
Met
>WENV170297868
CESF01016597
305664
Bacteroidota
CAT
Met
>WENV170297977
CESF01030800
282369
Bacteroidota
TTT
Lys
>WENV170298122
CESF01050778
155786
Bacteroidota
TGG
Pro
>WENV170298617
CESF01139139
155786
Bacteroidota
TGG
Pro
>WENV170298272
CESF01082675
155808
Bacteroidota
TGG
Pro
>WENV170298602
CESF01138973
155808
Bacteroidota
TGG
Pro
>WENV170298478
CESF01125266
197494
Bacteroidota
GTC
Asp
>WENV170298064
CESF01042618
100107
Bacteroidota
GTA
Tyr
>WENV170298031
CESF01038240
399285
Bacteroidota
TTC
Glu
>WENV170297799
CESF01007175
21789
Bacteroidota
GGA
Ser
>WENV170298594
CESF01138828
121312
Bacteroidota
TAG
Leu
>WENV170298342
CESF01095460
284239
Bacteroidota
TTT
Lys
>WENV170298077
CESF01044805
299065
Bacteroidota
TTG
Gln
>WENV170297801
CESF01007744
483389
Bacteroidota
GCA
Cys
>WENV170298010
CESF01035416
483389
Bacteroidota
GCA
Cys
>WENV170298148
CESF01054890
286857
Bacteroidota
TTT
Lys
>WENV170298392
CESF01109218
183856
Bacteroidota
CAT
Met
>WENV170298362
CESF01101637
117928
Bacteroidota
GTA
Tyr
>WENV170298270
CESF01081891
181598
Bacteroidota
GTT
Asn
>WENV170298761
CESF01253641
186849
Bacteroidota
TCT
Arg
>WENV170298557
CESF01136991
488091
Bacteroidota
GCA
Cys
>WENV170298271
CESF01082192
413853
Bacteroidota
GGT
Thr
>WENV170298311
CESF01088196
118749
Bacteroidota
GTA
Tyr
>WENV170297974
CESF01030098
118418
Bacteroidota
TAG
Leu
>WENV170298398
CESF01109732
182234
Bacteroidota
TGT
Thr
>WENV170298336
CESF01094467
200485
Bacteroidota
CAT
Met
>WENV170298259
CESF01080239
183480
Bacteroidota
TGC
Ala
>WENV170297961
CESF01028663
176699
Bacteroidota
GTT
Asn
>WENV170297770
CESF01003472
156255
Bacteroidota
TAC
Val
>WENV170298319
CESF01090085
399343
Bacteroidota
TTC
Glu
>WENV170297862
CESF01015899
156340
Bacteroidota
GGG
Pro
>WENV170298393
CESF01109321
156340
Bacteroidota
GGG
Pro
>WENV170298140
CESF01053946
176708
Bacteroidota
GTG
His
>WENV170297905
CESF01021749
56162
Bacteroidota
TGA
Ser
>WENV170298516
CESF01132501
56162
Bacteroidota
TGA
Ser
>WENV170297800
CESF01007642
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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