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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170555520
CXWL01000903
195531
Bacteroidota
GTC
Asp
>WENV170556189
CXWL01005523
337835
Bacteroidota
GCC
Gly
>WENV170556192
CXWL01005523
155765
Bacteroidota
TAC
Val
>WENV170559166
CXWL01112439
148281
Bacteroidota
CAA
Leu
>WENV170559341
CXWL01119946
287318
Bacteroidota
GAA
Phe
>WENV170559350
CXWL01120152
156756
Bacteroidota
TGG
Pro
>WENV170559351
CXWL01120152
178367
Bacteroidota
TCT
Arg
>WENV170559353
CXWL01120170
64185
Bacteroidota
TGA
Ser
>WENV170559374
CXWL01120673
156756
Bacteroidota
TGG
Pro
>WENV170559400
CXWL01121640
352207
Bacteroidota
TCC
Gly
>WENV170559408
CXWL01121963
182413
Bacteroidota
GGC
Ala
>WENV170559410
CXWL01122121
307577
Bacteroidota
>WENV170559411
CXWL01122121
46844
Bacteroidota
TAA
Leu
>WENV170559439
CXWL01123425
142822
Bacteroidota
GTA
Tyr
>WENV170559478
CXWL01125133
182327
Bacteroidota
TGT
Thr
>WENV170559479
CXWL01125133
140923
Bacteroidota
GTA
Tyr
>WENV170559480
CXWL01125133
400985
Bacteroidota
GGT
Thr
>WENV170559489
CXWL01125637
285588
Bacteroidota
TTT
Lys
>WENV170559490
CXWL01125637
285588
Bacteroidota
TTT
Lys
>WENV170559517
CXWL01127039
149404
Bacteroidota
CAA
Leu
>WENV170559518
CXWL01127078
182413
Bacteroidota
GGC
Ala
>WENV170559525
CXWL01127526
182327
Bacteroidota
TGT
Thr
>WENV170559526
CXWL01127526
142822
Bacteroidota
GTA
Tyr
>WENV170559527
CXWL01127526
405962
Bacteroidota
GGT
Thr
>WENV170559528
CXWL01127526
480996
Bacteroidota
CCA
Trp
>WENV170559563
CXWL01129278
482119
Bacteroidota
TTG
Gln
>WENV170559564
CXWL01129314
356164
Bacteroidota
TCC
Gly
>WENV170559573
CXWL01130348
240785
Bacteroidota
GTC
Asp
>WENV170559580
CXWL01130678
197494
Bacteroidota
GTC
Asp
>WENV170559594
CXWL01132381
336000
Bacteroidota
CAT
Met
>WENV170559610
CXWL01133579
64185
Bacteroidota
TGA
Ser
>WENV170559633
CXWL01134340
144124
Bacteroidota
GTA
Tyr
>WENV170559634
CXWL01134340
405962
Bacteroidota
GGT
Thr
>WENV170559651
CXWL01134971
287318
Bacteroidota
GAA
Phe
>WENV170559663
CXWL01135328
192263
Bacteroidota
CAT
Met
>WENV170559672
CXWL01136299
283107
Bacteroidota
GCC
Gly
>WENV170559716
CXWL01141602
46780
Bacteroidota
TAA
Leu
>WENV170559732
CXWL01143451
142822
Bacteroidota
GTA
Tyr
>WENV170559736
CXWL01143914
179956
Bacteroidota
GTT
Asn
>WENV170559773
CXWL01149315
142822
Bacteroidota
GTA
Tyr
>WENV170559774
CXWL01149588
482086
Bacteroidota
>WENV170559807
CXWL01153065
481284
Bacteroidota
CCA
Trp
>WENV170559814
CXWL01154108
283107
Bacteroidota
GCC
Gly
>WENV170559827
CXWL01156312
404066
Bacteroidota
TTC
Glu
>WENV170559828
CXWL01156312
404066
Bacteroidota
TTC
Glu
>WENV170559891
CXWL01168213
140923
Bacteroidota
GTA
Tyr
>WENV170559908
CXWL01173209
179258
Bacteroidota
GTG
His
>WENV170559913
CXWL01173911
284315
Bacteroidota
GAA
Phe
>WENV170559922
CXWL01176557
366169
Bacteroidota
GAA
Phe
>WENV170559928
CXWL01177629
156756
Bacteroidota
TGG
Pro
>WENV170559929
CXWL01177888
176607
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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