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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183560262
OOBT01014334
235097
Bacteroidota
TTT
Lys
>WENV183559908
OOBT01001983
95987
Bacteroidota
CAA
Leu
>WENV183559571
OOBT01000083
339412
Bacteroidota
GGT
Thr
>WENV183559748
OOBT01000712
339412
Bacteroidota
GGT
Thr
>WENV183559899
OOBT01001885
235102
Bacteroidota
CGT
Thr
>WENV183559624
OOBT01000225
237796
Bacteroidota
CGT
Thr
>WENV183559653
OOBT01000311
243025
Bacteroidota
CAT
Met
>WENV183560020
OOBT01003579
126966
Bacteroidota
TAC
Val
>WENV183560035
OOBT01003887
126965
Bacteroidota
GGG
Pro
>WENV183560272
OOBT01015402
24174
Bacteroidota
GCT
Ser
>WENV183560394
OOBT01034983
338486
Bacteroidota
CAT
Met
>WENV183559601
OOBT01000164
413663
Bacteroidota
CTG
Gln
>WENV183559759
OOBT01000761
136244
Bacteroidota
TAC
Val
>WENV183559655
OOBT01000321
136244
Bacteroidota
TAC
Val
>WENV183559572
OOBT01000083
237797
Bacteroidota
CCA
Trp
>WENV183560085
OOBT01005070
436206
Bacteroidota
TTG
Gln
>WENV183559594
OOBT01000149
412479
Bacteroidota
TTG
Gln
>WENV183559646
OOBT01000288
147147
Bacteroidota
GTG
His
>WENV183560255
OOBT01013467
338124
Bacteroidota
CCG
Arg
>WENV183559843
OOBT01001389
146800
Bacteroidota
>WENV183559726
OOBT01000581
338132
Bacteroidota
GCA
Cys
>WENV183559583
OOBT01000124
193809
Bacteroidota
CAT
Met
>WENV183559887
OOBT01001694
37076
Bacteroidota
TAA
Leu
>WENV183560443
OOBT01055922
303954
Bacteroidota
GCC
Gly
>WENV183560059
OOBT01004469
144656
Bacteroidota
GTG
His
>WENV183559773
OOBT01000901
113604
Bacteroidota
>WENV183559874
OOBT01001669
52358
Bacteroidota
TGA
Ser
>WENV183559634
OOBT01000248
52358
Bacteroidota
TGA
Ser
>WENV183559582
OOBT01000117
154643
Bacteroidota
CAT
Met
>WENV183559734
OOBT01000624
415558
Bacteroidota
TTG
Gln
>WENV183560302
OOBT01019246
175704
Bacteroidota
TGC
Ala
>WENV183560281
OOBT01016733
144655
Bacteroidota
GGC
Ala
>WENV183559599
OOBT01000157
139743
Bacteroidota
GGG
Pro
>WENV183559557
OOBT01000059
139743
Bacteroidota
GGG
Pro
>WENV183559683
OOBT01000379
44852
Bacteroidota
TAA
Leu
>WENV183559549
OOBT01000043
44852
Bacteroidota
TAA
Leu
>WENV183560376
OOBT01032029
147439
Bacteroidota
TCT
Arg
>WENV183559755
OOBT01000753
150485
Bacteroidota
GTT
Asn
>WENV183559519
OOBT01000003
150485
Bacteroidota
GTT
Asn
>WENV183560006
OOBT01003205
196394
Bacteroidota
GTC
Asp
>WENV183559661
OOBT01000340
196394
Bacteroidota
GTC
Asp
>WENV183559767
OOBT01000829
425638
Bacteroidota
CTG
Gln
>WENV183559542
OOBT01000038
353927
Bacteroidota
TTC
Glu
>WENV183559999
OOBT01003092
414426
Bacteroidota
CTG
Gln
>WENV183560429
OOBT01048524
16224
Bacteroidota
GGA
Ser
>WENV183560018
OOBT01003520
235129
Bacteroidota
GCC
Gly
>WENV183560102
OOBT01005342
313363
Bacteroidota
GAA
Phe
>WENV183559757
OOBT01000754
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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