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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183562784
OOBW01001250
235182
Bacteroidota
>WENV183562836
OOBW01001789
144688
Bacteroidota
CAT
Met
>WENV183562498
OOBW01000160
235207
Bacteroidota
CAT
Met
>WENV183562497
OOBW01000160
235207
Bacteroidota
CAT
Met
>WENV183562267
OOBW01000017
235207
Bacteroidota
CAT
Met
>WENV183562328
OOBW01000044
338124
Bacteroidota
CCG
Arg
>WENV183562264
OOBW01000014
343138
Bacteroidota
CCT
Arg
>WENV183562852
OOBW01002033
338314
Bacteroidota
CCT
Arg
>WENV183562209
OOBW01000002
338125
Bacteroidota
CCT
Arg
>WENV183562472
OOBW01000135
301449
Bacteroidota
CGG
Pro
>WENV183562241
OOBW01000009
301449
Bacteroidota
CGG
Pro
>WENV183562240
OOBW01000008
235102
Bacteroidota
CGT
Thr
>WENV183562345
OOBW01000050
419272
Bacteroidota
CTG
Gln
>WENV183562665
OOBW01000463
425638
Bacteroidota
CTG
Gln
>WENV183562204
OOBW01000001
425638
Bacteroidota
CTG
Gln
>WENV183562783
OOBW01001237
338132
Bacteroidota
GCA
Cys
>WENV183562667
OOBW01000475
338132
Bacteroidota
GCA
Cys
>WENV183562333
OOBW01000046
338132
Bacteroidota
GCA
Cys
>WENV183562676
OOBW01000521
16224
Bacteroidota
GGA
Ser
>WENV183562346
OOBW01000050
16220
Bacteroidota
GGA
Ser
>WENV183562876
OOBW01002884
144596
Bacteroidota
GGC
Ala
>WENV183562407
OOBW01000096
144655
Bacteroidota
GGC
Ala
>WENV183562614
OOBW01000358
132360
Bacteroidota
GGG
Pro
>WENV183562344
OOBW01000050
132360
Bacteroidota
GGG
Pro
>WENV183562454
OOBW01000113
80607
Bacteroidota
GTA
Tyr
>WENV183562257
OOBW01000012
80607
Bacteroidota
GTA
Tyr
>WENV183562623
OOBW01000380
144656
Bacteroidota
GTG
His
>WENV183562458
OOBW01000113
144590
Bacteroidota
GTT
Asn
>WENV183562457
OOBW01000113
144590
Bacteroidota
GTT
Asn
>WENV183562245
OOBW01000010
150485
Bacteroidota
GTT
Asn
>WENV183562244
OOBW01000010
150485
Bacteroidota
GTT
Asn
>WENV183562243
OOBW01000010
150485
Bacteroidota
GTT
Asn
>WENV183562660
OOBW01000440
44852
Bacteroidota
TAA
Leu
>WENV183562212
OOBW01000002
44852
Bacteroidota
TAA
Leu
>WENV183563047
OOBW01019399
95618
Bacteroidota
TAG
Leu
>WENV183562384
OOBW01000075
95559
Bacteroidota
TAG
Leu
>WENV183562915
OOBW01004105
144933
Bacteroidota
TCT
Arg
>WENV183562605
OOBW01000334
52358
Bacteroidota
TGA
Ser
>WENV183562545
OOBW01000226
52358
Bacteroidota
TGA
Ser
>WENV183562465
OOBW01000125
52358
Bacteroidota
TGA
Ser
>WENV183562332
OOBW01000046
52358
Bacteroidota
TGA
Ser
>WENV183562259
OOBW01000013
52358
Bacteroidota
TGA
Ser
>WENV183562210
OOBW01000002
415410
Bacteroidota
TTG
Gln
>WENV183562685
OOBW01000545
415410
Bacteroidota
TTG
Gln
>WENV183562768
OOBW01001086
411629
Bacteroidota
TTG
Gln
>WENV183562461
OOBW01000120
235097
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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