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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183569642
OOCC01000003
339412
Bacteroidota
GGT
Thr
>WENV183569643
OOCC01000003
237797
Bacteroidota
CCA
Trp
>WENV183569659
OOCC01000016
52358
Bacteroidota
TGA
Ser
>WENV183569661
OOCC01000017
412479
Bacteroidota
TTG
Gln
>WENV183569663
OOCC01000018
44852
Bacteroidota
TAA
Leu
>WENV183569667
OOCC01000021
97336
Bacteroidota
CAG
Leu
>WENV183569670
OOCC01000023
52358
Bacteroidota
TGA
Ser
>WENV183569673
OOCC01000027
95987
Bacteroidota
CAA
Leu
>WENV183569679
OOCC01000032
413663
Bacteroidota
CTG
Gln
>WENV183569678
OOCC01000032
413663
Bacteroidota
CTG
Gln
>WENV183569690
OOCC01000036
196394
Bacteroidota
GTC
Asp
>WENV183569689
OOCC01000036
196394
Bacteroidota
GTC
Asp
>WENV183569688
OOCC01000036
196394
Bacteroidota
GTC
Asp
>WENV183569717
OOCC01000085
37076
Bacteroidota
TAA
Leu
>WENV183569722
OOCC01000092
136244
Bacteroidota
TAC
Val
>WENV183569721
OOCC01000092
136244
Bacteroidota
TAC
Val
>WENV183569725
OOCC01000103
147147
Bacteroidota
GTG
His
>WENV183569724
OOCC01000103
147147
Bacteroidota
GTG
His
>WENV183569730
OOCC01000149
154643
Bacteroidota
CAT
Met
>WENV183569746
OOCC01000165
132360
Bacteroidota
GGG
Pro
>WENV183569748
OOCC01000171
301449
Bacteroidota
CGG
Pro
>WENV183569757
OOCC01000216
338132
Bacteroidota
GCA
Cys
>WENV183569756
OOCC01000216
338132
Bacteroidota
GCA
Cys
>WENV183569761
OOCC01000221
243025
Bacteroidota
CAT
Met
>WENV183569783
OOCC01000370
44852
Bacteroidota
TAA
Leu
>WENV183569787
OOCC01000402
235207
Bacteroidota
CAT
Met
>WENV183569798
OOCC01000528
144590
Bacteroidota
GTT
Asn
>WENV183569801
OOCC01000558
344769
Bacteroidota
CTC
Glu
>WENV183569808
OOCC01000724
150485
Bacteroidota
GTT
Asn
>WENV183569819
OOCC01001079
414426
Bacteroidota
CTG
Gln
>WENV183569834
OOCC01001245
235207
Bacteroidota
CAT
Met
>WENV183569842
OOCC01001413
132360
Bacteroidota
GGG
Pro
>WENV183569853
OOCC01001831
126641
Bacteroidota
TAC
Val
>WENV183569867
OOCC01002379
150485
Bacteroidota
GTT
Asn
>WENV183569871
OOCC01002471
267954
Bacteroidota
GCC
Gly
>WENV183569881
OOCC01002805
415410
Bacteroidota
TTG
Gln
>WENV183569902
OOCC01003603
338124
Bacteroidota
CCG
Arg
>WENV183569906
OOCC01003851
175704
Bacteroidota
TGC
Ala
>WENV183569915
OOCC01005098
235207
Bacteroidota
CAT
Met
>WENV183569925
OOCC01005509
280513
Bacteroidota
TTT
Lys
>WENV183569969
OOCC01011316
419272
Bacteroidota
CTG
Gln
>WENV183570031
OOCC01023753
235129
Bacteroidota
GCC
Gly
>WENV183570046
OOCC01029096
235097
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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