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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183609506
OODR01000001
344692
Bacteroidota
GGT
Thr
>WENV183609505
OODR01000001
341950
Bacteroidota
>WENV183609510
OODR01000002
243025
Bacteroidota
CAT
Met
>WENV183609519
OODR01000004
17323
Bacteroidota
GGA
Ser
>WENV183609523
OODR01000006
414426
Bacteroidota
CTG
Gln
>WENV183609542
OODR01000032
343138
Bacteroidota
CCT
Arg
>WENV183609566
OODR01000118
80607
Bacteroidota
GTA
Tyr
>WENV183609567
OODR01000121
425638
Bacteroidota
CTG
Gln
>WENV183609569
OODR01000124
95559
Bacteroidota
TAG
Leu
>WENV183609577
OODR01000155
419272
Bacteroidota
CTG
Gln
>WENV183609576
OODR01000155
132360
Bacteroidota
GGG
Pro
>WENV183609586
OODR01000183
50727
Bacteroidota
TGA
Ser
>WENV183609588
OODR01000201
338125
Bacteroidota
CCT
Arg
>WENV183609589
OODR01000206
48053
Bacteroidota
TGA
Ser
>WENV183609591
OODR01000214
132360
Bacteroidota
GGG
Pro
>WENV183609643
OODR01000478
144655
Bacteroidota
GGC
Ala
>WENV183609647
OODR01000502
338155
Bacteroidota
CTC
Glu
>WENV183609646
OODR01000502
23696
Bacteroidota
GCT
Ser
>WENV183609651
OODR01000521
338125
Bacteroidota
CCT
Arg
>WENV183609659
OODR01000608
338124
Bacteroidota
CCG
Arg
>WENV183609664
OODR01000694
80607
Bacteroidota
GTA
Tyr
>WENV183609665
OODR01000696
425638
Bacteroidota
CTG
Gln
>WENV183609669
OODR01000769
50727
Bacteroidota
TGA
Ser
>WENV183609681
OODR01000868
415410
Bacteroidota
TTG
Gln
>WENV183609687
OODR01000940
44852
Bacteroidota
TAA
Leu
>WENV183609688
OODR01000941
154643
Bacteroidota
CAT
Met
>WENV183609695
OODR01001034
280660
Bacteroidota
CCA
Trp
>WENV183609710
OODR01001148
235097
Bacteroidota
TTT
Lys
>WENV183609716
OODR01001252
16224
Bacteroidota
GGA
Ser
>WENV183609721
OODR01001322
415410
Bacteroidota
TTG
Gln
>WENV183609739
OODR01001705
235102
Bacteroidota
CGT
Thr
>WENV183609744
OODR01001794
16220
Bacteroidota
GGA
Ser
>WENV183609758
OODR01002379
415410
Bacteroidota
TTG
Gln
>WENV183609764
OODR01002461
80607
Bacteroidota
GTA
Tyr
>WENV183609786
OODR01003238
235207
Bacteroidota
CAT
Met
>WENV183609790
OODR01003249
235097
Bacteroidota
TTT
Lys
>WENV183609791
OODR01003255
338132
Bacteroidota
GCA
Cys
>WENV183609813
OODR01003746
153993
Bacteroidota
GAT
Ile
>WENV183609841
OODR01005048
50727
Bacteroidota
TGA
Ser
>WENV183609879
OODR01007126
144656
Bacteroidota
GTG
His
>WENV183609882
OODR01007380
59689
Bacteroidota
CAG
Leu
>WENV183609899
OODR01008351
235097
Bacteroidota
TTT
Lys
>WENV183609912
OODR01009362
132360
Bacteroidota
GGG
Pro
>WENV183609974
OODR01016202
80607
Bacteroidota
GTA
Tyr
>WENV183609987
OODR01017921
338132
Bacteroidota
GCA
Cys
>WENV183610016
OODR01027098
126641
Bacteroidota
TAC
Val
>WENV183610027
OODR01029470
338486
Bacteroidota
CAT
Met
>WENV183610060
OODR01034903
45423
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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