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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183619306
OOFQ01000876
165001
Bacteroidota
GTT
Asn
>WENV183619814
OOFQ01054785
162266
Bacteroidota
CAT
Met
>WENV183619843
OOFQ01061082
238765
Bacteroidota
GCC
Gly
>WENV183619407
OOFQ01004269
126691
Bacteroidota
TGG
Pro
>WENV183619408
OOFQ01004269
126691
Bacteroidota
TGG
Pro
>WENV183619643
OOFQ01026584
126691
Bacteroidota
TGG
Pro
>WENV183619709
OOFQ01035658
127458
Bacteroidota
GAC
Val
>WENV183619760
OOFQ01045239
95728
Bacteroidota
GTA
Tyr
>WENV183619832
OOFQ01058978
95728
Bacteroidota
GTA
Tyr
>WENV183619851
OOFQ01063210
60611
Bacteroidota
GCT
Ser
>WENV183619406
OOFQ01004269
60611
Bacteroidota
GCT
Ser
>WENV183619723
OOFQ01038773
161616
Bacteroidota
CAT
Met
>WENV183619656
OOFQ01027739
241347
Bacteroidota
TTG
Gln
>WENV183619575
OOFQ01018735
349438
Bacteroidota
GGT
Thr
>WENV183619452
OOFQ01007460
338568
Bacteroidota
TTC
Glu
>WENV183619368
OOFQ01002448
96418
Bacteroidota
GTA
Tyr
>WENV183619614
OOFQ01024196
45519
Bacteroidota
GGA
Ser
>WENV183619460
OOFQ01007945
45519
Bacteroidota
GGA
Ser
>WENV183619688
OOFQ01032390
150103
Bacteroidota
GTG
His
>WENV183619852
OOFQ01063210
127288
Bacteroidota
TGG
Pro
>WENV183619682
OOFQ01031184
127414
Bacteroidota
TGG
Pro
>WENV183619279
OOFQ01000564
242524
Bacteroidota
GCC
Gly
>WENV183619316
OOFQ01001007
341598
Bacteroidota
GCC
Gly
>WENV183619708
OOFQ01035596
44938
Bacteroidota
TGA
Ser
>WENV183619761
OOFQ01045239
235935
Bacteroidota
TCC
Gly
>WENV183619402
OOFQ01004046
145512
Bacteroidota
CAT
Met
>WENV183619511
OOFQ01012057
126712
Bacteroidota
GAC
Val
>WENV183619317
OOFQ01001007
58832
Bacteroidota
TAA
Leu
>WENV183619644
OOFQ01026584
145408
Bacteroidota
TCT
Arg
>WENV183619676
OOFQ01030703
341465
Bacteroidota
TTC
Glu
>WENV183619462
OOFQ01008342
341465
Bacteroidota
TTC
Glu
>WENV183619646
OOFQ01026886
240901
Bacteroidota
TTT
Lys
>WENV183619397
OOFQ01003788
235746
Bacteroidota
GAA
Phe
>WENV183619764
OOFQ01045460
145151
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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