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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183621484
OOFU01002894
238764
Bacteroidota
>WENV183621491
OOFU01003075
172532
Bacteroidota
GTC
Asp
>WENV183621577
OOFU01008978
150454
Bacteroidota
TGT
Thr
>WENV183621607
OOFU01014621
126691
Bacteroidota
TGG
Pro
>WENV183621627
OOFU01018414
369129
Bacteroidota
TTC
Glu
>WENV183621661
OOFU01025331
127414
Bacteroidota
TGG
Pro
>WENV183621687
OOFU01031099
146962
Bacteroidota
CAT
Met
>WENV183621706
OOFU01034928
338568
Bacteroidota
TTC
Glu
>WENV183621761
OOFU01051842
150584
Bacteroidota
CAT
Met
>WENV183621786
OOFU01060107
147106
Bacteroidota
CAT
Met
>WENV183621821
OOFU01072049
100198
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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