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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183645446
OQVQ01007239
95987
Bacteroidota
CAA
Leu
>WENV183645508
OQVQ01009579
95987
Bacteroidota
CAA
Leu
>WENV183645438
OQVQ01006999
338486
Bacteroidota
CAT
Met
>WENV183645996
OQVQ01056519
144695
Bacteroidota
CAT
Met
>WENV183645128
OQVQ01001174
147148
Bacteroidota
CAT
Met
>WENV183645799
OQVQ01028686
237797
Bacteroidota
CCA
Trp
>WENV183645475
OQVQ01008480
412236
Bacteroidota
CCC
Gly
>WENV183644965
OQVQ01000304
238810
Bacteroidota
CGG
Pro
>WENV183644883
OQVQ01000153
238810
Bacteroidota
CGG
Pro
>WENV183645753
OQVQ01023788
238606
Bacteroidota
CGG
Pro
>WENV183644920
OQVQ01000189
237796
Bacteroidota
CGT
Thr
>WENV183645474
OQVQ01008480
237796
Bacteroidota
CGT
Thr
>WENV183645740
OQVQ01023359
237796
Bacteroidota
CGT
Thr
>WENV183646025
OQVQ01064857
237796
Bacteroidota
CGT
Thr
>WENV183645166
OQVQ01001334
344769
Bacteroidota
CTC
Glu
>WENV183644976
OQVQ01000336
344769
Bacteroidota
CTC
Glu
>WENV183645032
OQVQ01000632
413663
Bacteroidota
CTG
Gln
>WENV183645095
OQVQ01001014
413663
Bacteroidota
CTG
Gln
>WENV183645002
OQVQ01000433
59498
Bacteroidota
GAG
Leu
>WENV183645902
OQVQ01041523
338132
Bacteroidota
GCA
Cys
>WENV183645746
OQVQ01023647
235129
Bacteroidota
GCC
Gly
>WENV183644846
OQVQ01000077
24174
Bacteroidota
GCT
Ser
>WENV183645677
OQVQ01018702
339412
Bacteroidota
GGT
Thr
>WENV183645034
OQVQ01000635
146764
Bacteroidota
GTC
Asp
>WENV183645306
OQVQ01003388
147147
Bacteroidota
GTG
His
>WENV183644868
OQVQ01000113
155123
Bacteroidota
GTT
Asn
>WENV183645067
OQVQ01000762
37076
Bacteroidota
TAA
Leu
>WENV183646047
OQVQ01070025
147439
Bacteroidota
TCT
Arg
>WENV183645180
OQVQ01001482
46489
Bacteroidota
TGA
Ser
>WENV183645388
OQVQ01005295
167013
Bacteroidota
TGG
Pro
>WENV183645241
OQVQ01002340
145504
Bacteroidota
TGT
Thr
>WENV183645425
OQVQ01006539
412479
Bacteroidota
TTG
Gln
>WENV183644970
OQVQ01000327
412479
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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