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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183657217
OQWI01004606
95987
Bacteroidota
CAA
Leu
>WENV183657596
OQWI01021131
95987
Bacteroidota
CAA
Leu
>WENV183656849
OQWI01000467
141635
Bacteroidota
TAC
Val
>WENV183656830
OQWI01000410
267954
Bacteroidota
GCC
Gly
>WENV183656823
OQWI01000380
237796
Bacteroidota
CGT
Thr
>WENV183656989
OQWI01001336
237796
Bacteroidota
CGT
Thr
>WENV183657835
OQWI01048736
237796
Bacteroidota
CGT
Thr
>WENV183657862
OQWI01055125
24174
Bacteroidota
GCT
Ser
>WENV183656810
OQWI01000323
394247
Bacteroidota
CTC
Glu
>WENV183657875
OQWI01057335
237797
Bacteroidota
CCA
Trp
>WENV183656881
OQWI01000682
144695
Bacteroidota
CAT
Met
>WENV183657182
OQWI01004013
412479
Bacteroidota
TTG
Gln
>WENV183657743
OQWI01035556
128251
Bacteroidota
TGG
Pro
>WENV183657039
OQWI01001774
147147
Bacteroidota
GTG
His
>WENV183656728
OQWI01000099
155123
Bacteroidota
GTT
Asn
>WENV183657620
OQWI01023432
344692
Bacteroidota
GGT
Thr
>WENV183657130
OQWI01003050
193809
Bacteroidota
CAT
Met
>WENV183656870
OQWI01000581
251266
Bacteroidota
CTT
Lys
>WENV183657150
OQWI01003328
53439
Bacteroidota
TGA
Ser
>WENV183657580
OQWI01019449
143169
Bacteroidota
GGG
Pro
>WENV183657926
OQWI01071639
147148
Bacteroidota
CAT
Met
>WENV183657553
OQWI01017786
415558
Bacteroidota
TTG
Gln
>WENV183657489
OQWI01013884
415558
Bacteroidota
TTG
Gln
>WENV183657128
OQWI01002989
196394
Bacteroidota
GTC
Asp
>WENV183657127
OQWI01002989
196394
Bacteroidota
GTC
Asp
>WENV183656805
OQWI01000310
196394
Bacteroidota
GTC
Asp
>WENV183657237
OQWI01005076
412236
Bacteroidota
CCC
Gly
>WENV183657527
OQWI01015812
96124
Bacteroidota
TAG
Leu
>WENV183657320
OQWI01007364
59498
Bacteroidota
GAG
Leu
>WENV183657148
OQWI01003287
313363
Bacteroidota
GAA
Phe
>WENV183657138
OQWI01003192
313363
Bacteroidota
GAA
Phe
>WENV183656700
OQWI01000034
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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