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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183658415
OQWM01002011
95987
Bacteroidota
CAA
Leu
>WENV183658428
OQWM01002158
95987
Bacteroidota
CAA
Leu
>WENV183658928
OQWM01008175
95987
Bacteroidota
CAA
Leu
>WENV183659466
OQWM01026539
95987
Bacteroidota
CAA
Leu
>WENV183659031
OQWM01010600
339412
Bacteroidota
GGT
Thr
>WENV183658796
OQWM01006074
235102
Bacteroidota
CGT
Thr
>WENV183658405
OQWM01001972
237796
Bacteroidota
CGT
Thr
>WENV183658866
OQWM01007152
237796
Bacteroidota
CGT
Thr
>WENV183658920
OQWM01008032
237796
Bacteroidota
CGT
Thr
>WENV183658930
OQWM01008201
237796
Bacteroidota
CGT
Thr
>WENV183659985
OQWM01091865
126966
Bacteroidota
TAC
Val
>WENV183658667
OQWM01004449
97336
Bacteroidota
CAG
Leu
>WENV183658175
OQWM01000615
24174
Bacteroidota
GCT
Ser
>WENV183658471
OQWM01002492
413663
Bacteroidota
CTG
Gln
>WENV183658403
OQWM01001969
413663
Bacteroidota
CTG
Gln
>WENV183658106
OQWM01000320
413663
Bacteroidota
CTG
Gln
>WENV183658905
OQWM01007798
144695
Bacteroidota
CAT
Met
>WENV183658809
OQWM01006188
144695
Bacteroidota
CAT
Met
>WENV183658036
OQWM01000103
144695
Bacteroidota
CAT
Met
>WENV183659559
OQWM01034008
412479
Bacteroidota
TTG
Gln
>WENV183659215
OQWM01015834
80835
Bacteroidota
GTA
Tyr
>WENV183658990
OQWM01009610
147147
Bacteroidota
GTG
His
>WENV183658607
OQWM01003844
147147
Bacteroidota
GTG
His
>WENV183658321
OQWM01001428
147147
Bacteroidota
GTG
His
>WENV183658310
OQWM01001365
147147
Bacteroidota
GTG
His
>WENV183658857
OQWM01007016
155123
Bacteroidota
GTT
Asn
>WENV183658820
OQWM01006345
155123
Bacteroidota
GTT
Asn
>WENV183659016
OQWM01010220
236125
Bacteroidota
GAA
Phe
>WENV183659615
OQWM01038651
145504
Bacteroidota
TGT
Thr
>WENV183658855
OQWM01006901
146800
Bacteroidota
>WENV183659322
OQWM01019507
45088
Bacteroidota
TGA
Ser
>WENV183660072
OQWM01112950
235203
Bacteroidota
TTT
Lys
>WENV183658064
OQWM01000193
238810
Bacteroidota
CGG
Pro
>WENV183659118
OQWM01012983
37076
Bacteroidota
TAA
Leu
>WENV183659084
OQWM01012107
37076
Bacteroidota
TAA
Leu
>WENV183658742
OQWM01005440
37076
Bacteroidota
TAA
Leu
>WENV183658354
OQWM01001676
37076
Bacteroidota
TAA
Leu
>WENV183658311
OQWM01001370
37076
Bacteroidota
TAA
Leu
>WENV183658041
OQWM01000122
412235
Bacteroidota
>WENV183658960
OQWM01009109
344769
Bacteroidota
CTC
Glu
>WENV183658309
OQWM01001365
344769
Bacteroidota
CTC
Glu
>WENV183658126
OQWM01000362
344769
Bacteroidota
CTC
Glu
>WENV183658122
OQWM01000357
344769
Bacteroidota
CTC
Glu
>WENV183658029
OQWM01000093
344769
Bacteroidota
CTC
Glu
>WENV183658420
OQWM01002052
147148
Bacteroidota
CAT
Met
>WENV183658778
OQWM01005935
415558
Bacteroidota
TTG
Gln
>WENV183658658
OQWM01004358
415558
Bacteroidota
TTG
Gln
>WENV183659308
OQWM01018989
95986
Bacteroidota
GTA
Tyr
>WENV183659273
OQWM01017591
146762
Bacteroidota
TGG
Pro
>WENV183658460
OQWM01002405
146762
Bacteroidota
TGG
Pro
>WENV183659272
OQWM01017591
412236
Bacteroidota
CCC
Gly
>WENV183659211
OQWM01015754
146764
Bacteroidota
GTC
Asp
>WENV183658736
OQWM01005395
146764
Bacteroidota
GTC
Asp
>WENV183658695
OQWM01004823
146764
Bacteroidota
GTC
Asp
>WENV183658549
OQWM01003150
146764
Bacteroidota
GTC
Asp
>WENV183658430
OQWM01002179
146764
Bacteroidota
GTC
Asp
>WENV183658255
OQWM01001015
146764
Bacteroidota
GTC
Asp
>WENV183658270
OQWM01001085
96124
Bacteroidota
TAG
Leu
>WENV183658668
OQWM01004449
59498
Bacteroidota
GAG
Leu
>WENV183658109
OQWM01000325
127023
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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