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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183734120
PJTZ01000068
176607
Bacteroidota
CAT
Met
>WENV183734122
PJTZ01000069
176607
Bacteroidota
CAT
Met
>WENV183734137
PJTZ01000080
176607
Bacteroidota
CAT
Met
>WENV183734026
PJTZ01000022
155775
Bacteroidota
TAC
Val
>WENV183734073
PJTZ01000040
155775
Bacteroidota
TAC
Val
>WENV183733981
PJTZ01000011
56539
Bacteroidota
TGA
Ser
>WENV183734001
PJTZ01000016
56539
Bacteroidota
TGA
Ser
>WENV183734154
PJTZ01000108
56539
Bacteroidota
TGA
Ser
>WENV183734162
PJTZ01000116
56539
Bacteroidota
TGA
Ser
>WENV183734179
PJTZ01000141
56539
Bacteroidota
TGA
Ser
>WENV183734223
PJTZ01000295
56539
Bacteroidota
TGA
Ser
>WENV183734633
PJTZ01028128
56539
Bacteroidota
TGA
Ser
>WENV183734722
PJTZ01050593
56539
Bacteroidota
TGA
Ser
>WENV183734066
PJTZ01000036
352207
Bacteroidota
TCC
Gly
>WENV183733979
PJTZ01000011
179377
Bacteroidota
GTG
His
>WENV183733980
PJTZ01000011
179377
Bacteroidota
GTG
His
>WENV183734667
PJTZ01035211
402171
Bacteroidota
TTC
Glu
>WENV183734121
PJTZ01000069
179373
Bacteroidota
CAT
Met
>WENV183734513
PJTZ01013517
403915
Bacteroidota
GGT
Thr
>WENV183734512
PJTZ01013517
317815
Bacteroidota
TCC
Gly
>WENV183734028
PJTZ01000022
284228
Bacteroidota
CAT
Met
>WENV183734029
PJTZ01000022
284228
Bacteroidota
CAT
Met
>WENV183734030
PJTZ01000022
284228
Bacteroidota
CAT
Met
>WENV183734031
PJTZ01000022
284228
Bacteroidota
CAT
Met
>WENV183734148
PJTZ01000091
218274
Bacteroidota
CAT
Met
>WENV183734092
PJTZ01000050
281213
Bacteroidota
TGT
Thr
>WENV183734064
PJTZ01000036
281213
Bacteroidota
TGT
Thr
>WENV183734124
PJTZ01000070
281213
Bacteroidota
TGT
Thr
>WENV183734060
PJTZ01000033
281213
Bacteroidota
TGT
Thr
>WENV183734061
PJTZ01000033
281213
Bacteroidota
TGT
Thr
>WENV183734584
PJTZ01020499
200516
Bacteroidota
CAT
Met
>WENV183733965
PJTZ01000008
298201
Bacteroidota
TTT
Lys
>WENV183734059
PJTZ01000033
298201
Bacteroidota
TTT
Lys
>WENV183734178
PJTZ01000141
298201
Bacteroidota
TTT
Lys
>WENV183734645
PJTZ01030285
337835
Bacteroidota
GCC
Gly
>WENV183734067
PJTZ01000036
403862
Bacteroidota
GGT
Thr
>WENV183734715
PJTZ01050443
403862
Bacteroidota
GGT
Thr
>WENV183734004
PJTZ01000017
179380
Bacteroidota
GGG
Pro
>WENV183734167
PJTZ01000120
179380
Bacteroidota
GGG
Pro
>WENV183734192
PJTZ01000172
281193
Bacteroidota
CAT
Met
>WENV183734197
PJTZ01000179
281193
Bacteroidota
CAT
Met
>WENV183734198
PJTZ01000179
281193
Bacteroidota
CAT
Met
>WENV183734183
PJTZ01000153
281193
Bacteroidota
CAT
Met
>WENV183734184
PJTZ01000157
281193
Bacteroidota
CAT
Met
>WENV183734191
PJTZ01000172
281193
Bacteroidota
CAT
Met
>WENV183734564
PJTZ01018186
284522
Bacteroidota
TTG
Gln
>WENV183734660
PJTZ01033268
481284
Bacteroidota
CCA
Trp
>WENV183734123
PJTZ01000069
179374
Bacteroidota
TGG
Pro
>WENV183734180
PJTZ01000143
179374
Bacteroidota
TGG
Pro
>WENV183734189
PJTZ01000172
179374
Bacteroidota
TGG
Pro
>WENV183734193
PJTZ01000175
179374
Bacteroidota
TGG
Pro
>WENV183734195
PJTZ01000179
179374
Bacteroidota
TGG
Pro
>WENV183734259
PJTZ01000559
179374
Bacteroidota
TGG
Pro
>WENV183734260
PJTZ01000559
179374
Bacteroidota
TGG
Pro
>WENV183734023
PJTZ01000021
480500
Bacteroidota
GCA
Cys
>WENV183734062
PJTZ01000035
480500
Bacteroidota
GCA
Cys
>WENV183734087
PJTZ01000046
480500
Bacteroidota
GCA
Cys
>WENV183734074
PJTZ01000040
156726
Bacteroidota
TAC
Val
>WENV183734091
PJTZ01000048
156726
Bacteroidota
TAC
Val
>WENV183734068
PJTZ01000036
481263
Bacteroidota
CCA
Trp
>WENV183733963
PJTZ01000008
147838
Bacteroidota
CAA
Leu
>WENV183733977
PJTZ01000011
147838
Bacteroidota
CAA
Leu
>WENV183733991
PJTZ01000013
363233
Bacteroidota
TTT
Lys
>WENV183734069
PJTZ01000037
363233
Bacteroidota
TTT
Lys
>WENV183734149
PJTZ01000098
363233
Bacteroidota
TTT
Lys
>WENV183734155
PJTZ01000108
363233
Bacteroidota
TTT
Lys
>WENV183734161
PJTZ01000116
363233
Bacteroidota
TTT
Lys
>WENV183734033
PJTZ01000023
281207
Bacteroidota
GAA
Phe
>WENV183734034
PJTZ01000023
281207
Bacteroidota
GAA
Phe
>WENV183734130
PJTZ01000074
281207
Bacteroidota
GAA
Phe
>WENV183734131
PJTZ01000074
281207
Bacteroidota
GAA
Phe
>WENV183734165
PJTZ01000120
281207
Bacteroidota
GAA
Phe
>WENV183734166
PJTZ01000120
281207
Bacteroidota
GAA
Phe
>WENV183733983
PJTZ01000011
281207
Bacteroidota
GAA
Phe
>WENV183734540
PJTZ01016251
284068
Bacteroidota
TTT
Lys
>WENV183734550
PJTZ01017122
284068
Bacteroidota
TTT
Lys
>WENV183734141
PJTZ01000087
183378
Bacteroidota
GGC
Ala
>WENV183734146
PJTZ01000091
183378
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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