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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183735790
PJUB01002575
480996
Bacteroidota
CCA
Trp
>WENV183735831
PJUB01004116
344503
Bacteroidota
TTT
Lys
>WENV183735886
PJUB01008407
344503
Bacteroidota
TTT
Lys
>WENV183735887
PJUB01008407
344503
Bacteroidota
TTT
Lys
>WENV183735652
PJUB01000321
155775
Bacteroidota
TAC
Val
>WENV183735789
PJUB01002575
405962
Bacteroidota
GGT
Thr
>WENV183735544
PJUB01000039
56539
Bacteroidota
TGA
Ser
>WENV183735650
PJUB01000316
56539
Bacteroidota
TGA
Ser
>WENV183735733
PJUB01001009
56539
Bacteroidota
TGA
Ser
>WENV183735756
PJUB01001421
56539
Bacteroidota
TGA
Ser
>WENV183735795
PJUB01002782
56539
Bacteroidota
TGA
Ser
>WENV183735796
PJUB01002782
56539
Bacteroidota
TGA
Ser
>WENV183735882
PJUB01007691
182483
Bacteroidota
GTG
His
>WENV183735822
PJUB01003919
156756
Bacteroidota
TGG
Pro
>WENV183735860
PJUB01006250
156756
Bacteroidota
TGG
Pro
>WENV183735696
PJUB01000655
352207
Bacteroidota
TCC
Gly
>WENV183735701
PJUB01000691
192263
Bacteroidota
CAT
Met
>WENV183735542
PJUB01000039
179377
Bacteroidota
GTG
His
>WENV183735673
PJUB01000439
179377
Bacteroidota
GTG
His
>WENV183735767
PJUB01001850
179377
Bacteroidota
GTG
His
>WENV183735857
PJUB01005846
240785
Bacteroidota
GTC
Asp
>WENV183735858
PJUB01005846
240785
Bacteroidota
GTC
Asp
>WENV183735870
PJUB01006825
191942
Bacteroidota
TCG
Arg
>WENV183735803
PJUB01003209
287318
Bacteroidota
GAA
Phe
>WENV183735692
PJUB01000652
179373
Bacteroidota
CAT
Met
>WENV183735693
PJUB01000652
179373
Bacteroidota
CAT
Met
>WENV183735727
PJUB01000944
179373
Bacteroidota
CAT
Met
>WENV183735728
PJUB01000944
179373
Bacteroidota
CAT
Met
>WENV183735837
PJUB01004503
349713
Bacteroidota
TCC
Gly
>WENV183735838
PJUB01004503
349713
Bacteroidota
TCC
Gly
>WENV183735788
PJUB01002575
140923
Bacteroidota
GTA
Tyr
>WENV183735830
PJUB01004109
140923
Bacteroidota
GTA
Tyr
>WENV183735787
PJUB01002575
177083
Bacteroidota
TGT
Thr
>WENV183735792
PJUB01002708
177083
Bacteroidota
TGT
Thr
>WENV183735793
PJUB01002708
177083
Bacteroidota
TGT
Thr
>WENV183735813
PJUB01003664
336000
Bacteroidota
CAT
Met
>WENV183735602
PJUB01000149
284228
Bacteroidota
CAT
Met
>WENV183735603
PJUB01000149
284228
Bacteroidota
CAT
Met
>WENV183735714
PJUB01000801
284228
Bacteroidota
CAT
Met
>WENV183735929
PJUB01012716
284228
Bacteroidota
CAT
Met
>WENV183735993
PJUB01026178
284228
Bacteroidota
CAT
Met
>WENV183735994
PJUB01026178
284228
Bacteroidota
CAT
Met
>WENV183736010
PJUB01031453
284228
Bacteroidota
CAT
Met
>WENV183735839
PJUB01004510
283107
Bacteroidota
GCC
Gly
>WENV183735918
PJUB01011470
144124
Bacteroidota
GTA
Tyr
>WENV183735453
PJUB01000008
281213
Bacteroidota
TGT
Thr
>WENV183735454
PJUB01000008
281213
Bacteroidota
TGT
Thr
>WENV183735455
PJUB01000008
281213
Bacteroidota
TGT
Thr
>WENV183735694
PJUB01000655
281213
Bacteroidota
TGT
Thr
>WENV183735867
PJUB01006676
281213
Bacteroidota
TGT
Thr
>WENV183735868
PJUB01006676
281213
Bacteroidota
TGT
Thr
>WENV183735697
PJUB01000655
403862
Bacteroidota
GGT
Thr
>WENV183735570
PJUB01000053
179380
Bacteroidota
GGG
Pro
>WENV183735712
PJUB01000789
179380
Bacteroidota
GGG
Pro
>WENV183735686
PJUB01000549
179374
Bacteroidota
TGG
Pro
>WENV183735687
PJUB01000549
179374
Bacteroidota
TGG
Pro
>WENV183735688
PJUB01000549
179374
Bacteroidota
TGG
Pro
>WENV183735721
PJUB01000885
179374
Bacteroidota
TGG
Pro
>WENV183735722
PJUB01000885
179374
Bacteroidota
TGG
Pro
>WENV183735942
PJUB01016386
179374
Bacteroidota
TGG
Pro
>WENV183735685
PJUB01000549
480500
Bacteroidota
GCA
Cys
>WENV183735820
PJUB01003909
485115
Bacteroidota
TTG
Gln
>WENV183735821
PJUB01003909
485115
Bacteroidota
TTG
Gln
>WENV183735802
PJUB01003194
482086
Bacteroidota
>WENV183735677
PJUB01000490
281210
Bacteroidota
GCC
Gly
>WENV183735769
PJUB01001996
281210
Bacteroidota
GCC
Gly
>WENV183735771
PJUB01002017
281210
Bacteroidota
GCC
Gly
>WENV183735908
PJUB01010392
281210
Bacteroidota
GCC
Gly
>WENV183735698
PJUB01000655
481263
Bacteroidota
CCA
Trp
>WENV183735853
PJUB01005489
409459
Bacteroidota
TTC
Glu
>WENV183735702
PJUB01000696
147838
Bacteroidota
CAA
Leu
>WENV183735741
PJUB01001077
147838
Bacteroidota
CAA
Leu
>WENV183735854
PJUB01005550
147838
Bacteroidota
CAA
Leu
>WENV183736006
PJUB01030217
147838
Bacteroidota
CAA
Leu
>WENV183735840
PJUB01004510
46780
Bacteroidota
TAA
Leu
>WENV183735941
PJUB01015574
64185
Bacteroidota
TGA
Ser
>WENV183735651
PJUB01000321
156339
Bacteroidota
TAC
Val
>WENV183735653
PJUB01000321
156339
Bacteroidota
TAC
Val
>WENV183735719
PJUB01000863
156339
Bacteroidota
TAC
Val
>WENV183735815
PJUB01003704
156339
Bacteroidota
TAC
Val
>WENV183735770
PJUB01002017
281207
Bacteroidota
GAA
Phe
>WENV183735907
PJUB01010392
281207
Bacteroidota
GAA
Phe
>WENV183735842
PJUB01004803
119078
Bacteroidota
TAG
Leu
>WENV183735819
PJUB01003887
178366
Bacteroidota
CAT
Met
>WENV183735823
PJUB01003919
184112
Bacteroidota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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