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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183742333
PJUH01009896
56551
Bacteroidota
>WENV183742147
PJUH01000596
147852
Bacteroidota
CAA
Leu
>WENV183741892
PJUH01000002
147838
Bacteroidota
CAA
Leu
>WENV183741957
PJUH01000017
147838
Bacteroidota
CAA
Leu
>WENV183742251
PJUH01003867
284518
Bacteroidota
CAT
Met
>WENV183742252
PJUH01003867
284518
Bacteroidota
CAT
Met
>WENV183741976
PJUH01000024
179373
Bacteroidota
CAT
Met
>WENV183741977
PJUH01000024
179373
Bacteroidota
CAT
Met
>WENV183742442
PJUH01035192
284228
Bacteroidota
CAT
Met
>WENV183742443
PJUH01035192
284228
Bacteroidota
CAT
Met
>WENV183742449
PJUH01035265
284228
Bacteroidota
CAT
Met
>WENV183742450
PJUH01035265
284228
Bacteroidota
CAT
Met
>WENV183741922
PJUH01000008
284228
Bacteroidota
CAT
Met
>WENV183741923
PJUH01000008
284228
Bacteroidota
CAT
Met
>WENV183741994
PJUH01000034
284228
Bacteroidota
CAT
Met
>WENV183742047
PJUH01000106
200516
Bacteroidota
CAT
Met
>WENV183742185
PJUH01001164
481345
Bacteroidota
CCA
Trp
>WENV183741943
PJUH01000012
481263
Bacteroidota
CCA
Trp
>WENV183742154
PJUH01000744
284315
Bacteroidota
GAA
Phe
>WENV183742155
PJUH01000744
284315
Bacteroidota
GAA
Phe
>WENV183741988
PJUH01000028
281207
Bacteroidota
GAA
Phe
>WENV183742039
PJUH01000096
111481
Bacteroidota
GAG
Leu
>WENV183741981
PJUH01000024
480500
Bacteroidota
GCA
Cys
>WENV183742102
PJUH01000274
490277
Bacteroidota
GCA
Cys
>WENV183742008
PJUH01000043
322882
Bacteroidota
GCC
Gly
>WENV183741989
PJUH01000028
281210
Bacteroidota
GCC
Gly
>WENV183742144
PJUH01000523
281210
Bacteroidota
GCC
Gly
>WENV183742094
PJUH01000243
57300
Bacteroidota
GCT
Ser
>WENV183742030
PJUH01000084
36295
Bacteroidota
GGA
Ser
>WENV183741902
PJUH01000004
179380
Bacteroidota
GGG
Pro
>WENV183742176
PJUH01001045
400985
Bacteroidota
GGT
Thr
>WENV183741942
PJUH01000012
403862
Bacteroidota
GGT
Thr
>WENV183742377
PJUH01018048
140945
Bacteroidota
GTA
Tyr
>WENV183742256
PJUH01004133
195531
Bacteroidota
GTC
Asp
>WENV183742271
PJUH01004865
195531
Bacteroidota
GTC
Asp
>WENV183742017
PJUH01000059
179468
Bacteroidota
GTC
Asp
>WENV183742018
PJUH01000059
179468
Bacteroidota
GTC
Asp
>WENV183742019
PJUH01000059
179468
Bacteroidota
GTC
Asp
>WENV183741888
PJUH01000002
179377
Bacteroidota
GTG
His
>WENV183741889
PJUH01000002
179377
Bacteroidota
GTG
His
>WENV183742184
PJUH01001161
179466
Bacteroidota
GTG
His
>WENV183742065
PJUH01000136
192365
Bacteroidota
GTT
Asn
>WENV183742066
PJUH01000136
192365
Bacteroidota
GTT
Asn
>WENV183742387
PJUH01021110
179905
Bacteroidota
GTT
Asn
>WENV183742009
PJUH01000043
75644
Bacteroidota
TAA
Leu
>WENV183741920
PJUH01000008
155775
Bacteroidota
TAC
Val
>WENV183742172
PJUH01000914
169713
Bacteroidota
TAC
Val
>WENV183741919
PJUH01000008
156339
Bacteroidota
TAC
Val
>WENV183741921
PJUH01000008
156339
Bacteroidota
TAC
Val
>WENV183742171
PJUH01000914
156347
Bacteroidota
TAC
Val
>WENV183742007
PJUH01000043
118400
Bacteroidota
TAG
Leu
>WENV183742010
PJUH01000043
118400
Bacteroidota
TAG
Leu
>WENV183741941
PJUH01000012
352207
Bacteroidota
TCC
Gly
>WENV183742374
PJUH01018018
372872
Bacteroidota
TCC
Gly
>WENV183742175
PJUH01001045
317815
Bacteroidota
TCC
Gly
>WENV183742378
PJUH01018048
317815
Bacteroidota
TCC
Gly
>WENV183742049
PJUH01000109
211453
Bacteroidota
TCT
Arg
>WENV183742096
PJUH01000243
211453
Bacteroidota
TCT
Arg
>WENV183741891
PJUH01000002
56539
Bacteroidota
TGA
Ser
>WENV183742045
PJUH01000103
56539
Bacteroidota
TGA
Ser
>WENV183742046
PJUH01000103
56539
Bacteroidota
TGA
Ser
>WENV183741978
PJUH01000024
179374
Bacteroidota
TGG
Pro
>WENV183741979
PJUH01000024
179374
Bacteroidota
TGG
Pro
>WENV183741980
PJUH01000024
179374
Bacteroidota
TGG
Pro
>WENV183742283
PJUH01006013
179467
Bacteroidota
TGT
Thr
>WENV183742376
PJUH01018048
179467
Bacteroidota
TGT
Thr
>WENV183741885
PJUH01000002
281213
Bacteroidota
TGT
Thr
>WENV183741886
PJUH01000002
281213
Bacteroidota
TGT
Thr
>WENV183741887
PJUH01000002
281213
Bacteroidota
TGT
Thr
>WENV183741939
PJUH01000012
281213
Bacteroidota
TGT
Thr
>WENV183742090
PJUH01000228
401479
Bacteroidota
TTC
Glu
>WENV183742091
PJUH01000228
401479
Bacteroidota
TTC
Glu
>WENV183742116
PJUH01000352
400849
Bacteroidota
TTC
Glu
>WENV183742110
PJUH01000309
481286
Bacteroidota
TTG
Gln
>WENV183742219
PJUH01002050
481286
Bacteroidota
TTG
Gln
>WENV183741894
PJUH01000002
363233
Bacteroidota
TTT
Lys
>WENV183741956
PJUH01000017
363233
Bacteroidota
TTT
Lys
>WENV183741958
PJUH01000018
363233
Bacteroidota
TTT
Lys
>WENV183742044
PJUH01000103
363233
Bacteroidota
TTT
Lys
>WENV183742038
PJUH01000096
284520
Bacteroidota
TTT
Lys
>WENV183742040
PJUH01000096
284520
Bacteroidota
TTT
Lys
>WENV183742041
PJUH01000096
284520
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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