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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183742675
PJUI01000057
102881
Bacteroidota
GTA
Tyr
>WENV183742475
PJUI01000003
179467
Bacteroidota
TGT
Thr
>WENV183742465
PJUI01000002
211453
Bacteroidota
TCT
Arg
>WENV183742467
PJUI01000002
211453
Bacteroidota
TCT
Arg
>WENV183742553
PJUI01000013
155775
Bacteroidota
TAC
Val
>WENV183742520
PJUI01000006
322882
Bacteroidota
GCC
Gly
>WENV183742493
PJUI01000004
56539
Bacteroidota
TGA
Ser
>WENV183742755
PJUI01000115
56539
Bacteroidota
TGA
Ser
>WENV183742756
PJUI01000115
56539
Bacteroidota
TGA
Ser
>WENV183742484
PJUI01000003
481286
Bacteroidota
TTG
Gln
>WENV183742486
PJUI01000003
481286
Bacteroidota
TTG
Gln
>WENV183742480
PJUI01000003
400985
Bacteroidota
GGT
Thr
>WENV183742591
PJUI01000019
352207
Bacteroidota
TCC
Gly
>WENV183742676
PJUI01000057
352207
Bacteroidota
TCC
Gly
>WENV183742490
PJUI01000004
179377
Bacteroidota
GTG
His
>WENV183742491
PJUI01000004
179377
Bacteroidota
GTG
His
>WENV183742538
PJUI01000010
284518
Bacteroidota
CAT
Met
>WENV183742539
PJUI01000010
284518
Bacteroidota
CAT
Met
>WENV183742540
PJUI01000010
284518
Bacteroidota
CAT
Met
>WENV183742541
PJUI01000010
284518
Bacteroidota
CAT
Met
>WENV183742524
PJUI01000007
401158
Bacteroidota
CCT
Arg
>WENV183742616
PJUI01000031
30595
Bacteroidota
GCT
Ser
>WENV183742657
PJUI01000050
192365
Bacteroidota
GTT
Asn
>WENV183742658
PJUI01000050
192365
Bacteroidota
GTT
Asn
>WENV183742659
PJUI01000051
179373
Bacteroidota
CAT
Met
>WENV183742660
PJUI01000051
179373
Bacteroidota
CAT
Met
>WENV183742526
PJUI01000007
179689
Bacteroidota
GTC
Asp
>WENV183742477
PJUI01000003
317815
Bacteroidota
TCC
Gly
>WENV183742479
PJUI01000003
317815
Bacteroidota
TCC
Gly
>WENV183742518
PJUI01000006
169713
Bacteroidota
TAC
Val
>WENV183742481
PJUI01000003
481345
Bacteroidota
CCA
Trp
>WENV183742474
PJUI01000003
179466
Bacteroidota
GTG
His
>WENV183742453
PJUI01000001
282910
Bacteroidota
TTT
Lys
>WENV183742454
PJUI01000001
282910
Bacteroidota
TTT
Lys
>WENV183742462
PJUI01000002
147852
Bacteroidota
CAA
Leu
>WENV183742620
PJUI01000031
197501
Bacteroidota
TCT
Arg
>WENV183742515
PJUI01000006
401479
Bacteroidota
TTC
Glu
>WENV183742516
PJUI01000006
401479
Bacteroidota
TTC
Glu
>WENV183742469
PJUI01000002
179468
Bacteroidota
GTC
Asp
>WENV183742470
PJUI01000002
179468
Bacteroidota
GTC
Asp
>WENV183742471
PJUI01000002
179468
Bacteroidota
GTC
Asp
>WENV183742476
PJUI01000003
140945
Bacteroidota
GTA
Tyr
>WENV183742478
PJUI01000003
140945
Bacteroidota
GTA
Tyr
>WENV183742711
PJUI01000066
284228
Bacteroidota
CAT
Met
>WENV183742751
PJUI01000113
284228
Bacteroidota
CAT
Met
>WENV183742752
PJUI01000113
284228
Bacteroidota
CAT
Met
>WENV183742952
PJUI01018180
284228
Bacteroidota
CAT
Met
>WENV183742953
PJUI01018180
284228
Bacteroidota
CAT
Met
>WENV183742527
PJUI01000007
284228
Bacteroidota
CAT
Met
>WENV183742617
PJUI01000031
176427
Bacteroidota
TGG
Pro
>WENV183742618
PJUI01000031
176427
Bacteroidota
TGG
Pro
>WENV183742487
PJUI01000004
281213
Bacteroidota
TGT
Thr
>WENV183742488
PJUI01000004
281213
Bacteroidota
TGT
Thr
>WENV183742489
PJUI01000004
281213
Bacteroidota
TGT
Thr
>WENV183742589
PJUI01000019
281213
Bacteroidota
TGT
Thr
>WENV183742537
PJUI01000010
404657
Bacteroidota
TCG
Arg
>WENV183742523
PJUI01000006
200516
Bacteroidota
CAT
Met
>WENV183742592
PJUI01000019
403862
Bacteroidota
GGT
Thr
>WENV183742535
PJUI01000009
179380
Bacteroidota
GGG
Pro
>WENV183742459
PJUI01000001
147816
Bacteroidota
CAA
Leu
>WENV183742662
PJUI01000051
179374
Bacteroidota
TGG
Pro
>WENV183742663
PJUI01000051
179374
Bacteroidota
TGG
Pro
>WENV183742661
PJUI01000051
179374
Bacteroidota
TGG
Pro
>WENV183742514
PJUI01000006
400849
Bacteroidota
TTC
Glu
>WENV183742664
PJUI01000051
480500
Bacteroidota
GCA
Cys
>WENV183742619
PJUI01000031
56145
Bacteroidota
TGA
Ser
>WENV183742528
PJUI01000007
401031
Bacteroidota
TTC
Glu
>WENV183742468
PJUI01000002
36295
Bacteroidota
GGA
Ser
>WENV183742693
PJUI01000058
111481
Bacteroidota
GAG
Leu
>WENV183742472
PJUI01000002
56551
Bacteroidota
>WENV183742473
PJUI01000002
56551
Bacteroidota
>WENV183742485
PJUI01000003
490277
Bacteroidota
GCA
Cys
>WENV183742482
PJUI01000003
284315
Bacteroidota
GAA
Phe
>WENV183742483
PJUI01000003
284315
Bacteroidota
GAA
Phe
>WENV183742709
PJUI01000063
281210
Bacteroidota
GCC
Gly
>WENV183742811
PJUI01000267
281210
Bacteroidota
GCC
Gly
>WENV183742521
PJUI01000006
75644
Bacteroidota
TAA
Leu
>WENV183742593
PJUI01000019
481263
Bacteroidota
CCA
Trp
>WENV183742494
PJUI01000004
147838
Bacteroidota
CAA
Leu
>WENV183742633
PJUI01000036
147838
Bacteroidota
CAA
Leu
>WENV183742456
PJUI01000001
118464
Bacteroidota
TAG
Leu
>WENV183742649
PJUI01000042
363233
Bacteroidota
TTT
Lys
>WENV183742754
PJUI01000115
363233
Bacteroidota
TTT
Lys
>WENV183742496
PJUI01000004
363233
Bacteroidota
TTT
Lys
>WENV183742632
PJUI01000036
363233
Bacteroidota
TTT
Lys
>WENV183742552
PJUI01000013
156339
Bacteroidota
TAC
Val
>WENV183742554
PJUI01000013
156339
Bacteroidota
TAC
Val
>WENV183742463
PJUI01000002
57300
Bacteroidota
GCT
Ser
>WENV183742708
PJUI01000063
281207
Bacteroidota
GAA
Phe
>WENV183742692
PJUI01000058
284520
Bacteroidota
TTT
Lys
>WENV183742694
PJUI01000058
284520
Bacteroidota
TTT
Lys
>WENV183742695
PJUI01000058
284520
Bacteroidota
TTT
Lys
>WENV183742519
PJUI01000006
118400
Bacteroidota
TAG
Leu
>WENV183742522
PJUI01000006
118400
Bacteroidota
TAG
Leu
>WENV183742517
PJUI01000006
156347
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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