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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183727904
PJTP01004905
178431
Betaproteobacteria
GAT
Ile
>WENV183727936
PJTP01007715
212101
Betaproteobacteria
GAT
Ile
>WENV183727986
PJTP01012652
283940
Betaproteobacteria
TTC
Glu
>WENV183727987
PJTP01012652
283940
Betaproteobacteria
TTC
Glu
>WENV183727989
PJTP01012652
283940
Betaproteobacteria
TTC
Glu
>WENV183727833
PJTP01000944
282645
Betaproteobacteria
GCC
Gly
>WENV183727962
PJTP01010443
283937
Betaproteobacteria
GCC
Gly
>WENV183727963
PJTP01010443
283937
Betaproteobacteria
GCC
Gly
>WENV183727964
PJTP01010443
283937
Betaproteobacteria
GCC
Gly
>WENV183728010
PJTP01016365
305239
Betaproteobacteria
TTT
Lys
>WENV183727842
PJTP01001137
283190
Betaproteobacteria
CGT
Thr
>WENV183728117
PJTP01037981
400814
Betaproteobacteria
CAC
Val
>WENV183727918
PJTP01005460
178141
Betaproteobacteria
CAT
Met
>WENV183727919
PJTP01005460
178141
Betaproteobacteria
CAT
Met
>WENV183728168
PJTP01053540
176193
Betaproteobacteria
TTG
Gln
>WENV183728000
PJTP01014499
176193
Betaproteobacteria
TTG
Gln
>WENV183727872
PJTP01002188
282862
Betaproteobacteria
TGC
Ala
>WENV183728122
PJTP01038961
180897
Betaproteobacteria
TCT
Arg
>WENV183728034
PJTP01020706
8858
Betaproteobacteria
GCT
Ser
>WENV183728133
PJTP01041606
401202
Betaproteobacteria
CCT
Arg
>WENV183728120
PJTP01038834
284214
Betaproteobacteria
TAC
Val
>WENV183727844
PJTP01001145
283941
Betaproteobacteria
CTT
Lys
>WENV183727998
PJTP01014040
283941
Betaproteobacteria
CTT
Lys
>WENV183727803
PJTP01000509
323553
Betaproteobacteria
GTG
His
>WENV183727899
PJTP01004140
20508
Betaproteobacteria
GGA
Ser
>WENV183727790
PJTP01000355
178430
Betaproteobacteria
TTG
Gln
>WENV183728079
PJTP01028709
23222
Betaproteobacteria
CGA
Ser
>WENV183727862
PJTP01001494
281681
Betaproteobacteria
TTT
Lys
>WENV183727797
PJTP01000440
118059
Betaproteobacteria
TAG
Leu
>WENV183728017
PJTP01017393
73415
Betaproteobacteria
GTA
Tyr
>WENV183727814
PJTP01000663
183734
Betaproteobacteria
TCT
Arg
>WENV183727802
PJTP01000483
177009
Betaproteobacteria
GGG
Pro
>WENV183727994
PJTP01013025
177009
Betaproteobacteria
GGG
Pro
>WENV183727903
PJTP01004721
283938
Betaproteobacteria
CGT
Thr
>WENV183727819
PJTP01000754
29780
Betaproteobacteria
TGA
Ser
>WENV183727999
PJTP01014275
199655
Betaproteobacteria
TTG
Gln
>WENV183728019
PJTP01017393
414048
Betaproteobacteria
GGT
Thr
>WENV183727796
PJTP01000435
29692
Betaproteobacteria
CGA
Ser
>WENV183727863
PJTP01001587
283445
Betaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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