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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183744244
PJUK01002911
399347
Betaproteobacteria
CAC
Val
>WENV183744311
PJUK01006530
118123
Betaproteobacteria
CAG
Leu
>WENV183744213
PJUK01002131
178141
Betaproteobacteria
CAT
Met
>WENV183744019
PJUK01000151
178934
Betaproteobacteria
CAT
Met
>WENV183744020
PJUK01000151
178934
Betaproteobacteria
CAT
Met
>WENV183744049
PJUK01000229
184549
Betaproteobacteria
CAT
Met
>WENV183744133
PJUK01000673
184549
Betaproteobacteria
CAT
Met
>WENV183744460
PJUK01034329
283941
Betaproteobacteria
CTT
Lys
>WENV183744384
PJUK01015148
118157
Betaproteobacteria
GAG
Leu
>WENV183744332
PJUK01008578
176778
Betaproteobacteria
GAT
Ile
>WENV183744349
PJUK01009770
480973
Betaproteobacteria
GCA
Cys
>WENV183744348
PJUK01009649
20508
Betaproteobacteria
GGA
Ser
>WENV183744418
PJUK01022446
20385
Betaproteobacteria
GGA
Ser
>WENV183744310
PJUK01006443
177009
Betaproteobacteria
GGG
Pro
>WENV183743987
PJUK01000100
452715
Betaproteobacteria
GGT
Thr
>WENV183744374
PJUK01013788
281431
Betaproteobacteria
GTT
Asn
>WENV183744375
PJUK01013788
281431
Betaproteobacteria
GTT
Asn
>WENV183744443
PJUK01029656
328657
Betaproteobacteria
TAC
Val
>WENV183744285
PJUK01004678
499230
Betaproteobacteria
TCC
Gly
>WENV183743878
PJUK01000020
180897
Betaproteobacteria
TCT
Arg
>WENV183744345
PJUK01009276
56355
Betaproteobacteria
TGA
Ser
>WENV183744264
PJUK01003876
29825
Betaproteobacteria
TGA
Ser
>WENV183744381
PJUK01014251
29780
Betaproteobacteria
TGA
Ser
>WENV183744333
PJUK01008578
282862
Betaproteobacteria
TGC
Ala
>WENV183744370
PJUK01013239
284297
Betaproteobacteria
TGT
Thr
>WENV183744386
PJUK01015210
350355
Betaproteobacteria
TTC
Glu
>WENV183744387
PJUK01015210
350355
Betaproteobacteria
TTC
Glu
>WENV183744072
PJUK01000324
178217
Betaproteobacteria
TTG
Gln
>WENV183744307
PJUK01006318
178289
Betaproteobacteria
TTG
Gln
>WENV183744282
PJUK01004576
281681
Betaproteobacteria
TTT
Lys
>WENV183744289
PJUK01004834
281681
Betaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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