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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183744606
PJUL01000025
149229
Betaproteobacteria
TCT
Arg
>WENV183744714
PJUL01000088
175782
Betaproteobacteria
TCT
Arg
>WENV183744787
PJUL01000234
175782
Betaproteobacteria
TCT
Arg
>WENV183745298
PJUL01019032
145694
Betaproteobacteria
ACG
Arg
>WENV183745273
PJUL01013064
238654
Betaproteobacteria
TGT
Thr
>WENV183744795
PJUL01000251
237459
Betaproteobacteria
CTT
Lys
>WENV183744973
PJUL01000971
237459
Betaproteobacteria
CTT
Lys
>WENV183745304
PJUL01020669
23749
Betaproteobacteria
TGA
Ser
>WENV183745081
PJUL01002035
256728
Betaproteobacteria
GTT
Asn
>WENV183745079
PJUL01002035
256728
Betaproteobacteria
GTT
Asn
>WENV183744788
PJUL01000234
267868
Betaproteobacteria
GTG
His
>WENV183744753
PJUL01000170
267868
Betaproteobacteria
GTG
His
>WENV183744752
PJUL01000170
267868
Betaproteobacteria
GTG
His
>WENV183744712
PJUL01000088
267868
Betaproteobacteria
GTG
His
>WENV183744865
PJUL01000470
48899
Betaproteobacteria
TGA
Ser
>WENV183745080
PJUL01002035
293915
Betaproteobacteria
GTT
Asn
>WENV183745078
PJUL01002035
293915
Betaproteobacteria
GTT
Asn
>WENV183744996
PJUL01001195
293915
Betaproteobacteria
GTT
Asn
>WENV183745262
PJUL01011284
412422
Betaproteobacteria
GCA
Cys
>WENV183745046
PJUL01001591
412422
Betaproteobacteria
GCA
Cys
>WENV183744912
PJUL01000623
412422
Betaproteobacteria
GCA
Cys
>WENV183745088
PJUL01002163
95934
Betaproteobacteria
GAG
Leu
>WENV183745093
PJUL01002215
153173
Betaproteobacteria
CAT
Met
>WENV183744863
PJUL01000470
153173
Betaproteobacteria
CAT
Met
>WENV183744541
PJUL01000007
352197
Betaproteobacteria
GGT
Thr
>WENV183744831
PJUL01000346
339519
Betaproteobacteria
CCT
Arg
>WENV183744794
PJUL01000246
339519
Betaproteobacteria
CCT
Arg
>WENV183744888
PJUL01000551
23608
Betaproteobacteria
CGA
Ser
>WENV183744872
PJUL01000489
23608
Betaproteobacteria
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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