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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183576841
OOCJ01001686
184469
Fusobacteriota
TGG
Pro
>WENV183576871
OOCJ01002038
295075
Fusobacteriota
TAC
Val
>WENV183576887
OOCJ01002110
362179
Fusobacteriota
GTT
Asn
>WENV183576922
OOCJ01002840
21367
Fusobacteriota
GCT
Ser
>WENV183576930
OOCJ01002882
140772
Fusobacteriota
TAG
Leu
>WENV183576926
OOCJ01002882
407549
Fusobacteriota
TTC
Glu
>WENV183576929
OOCJ01002882
288878
Fusobacteriota
TGT
Thr
>WENV183576925
OOCJ01002882
316693
Fusobacteriota
CTT
Lys
>WENV183576927
OOCJ01002882
295075
Fusobacteriota
TAC
Val
>WENV183576938
OOCJ01003138
407549
Fusobacteriota
TTC
Glu
>WENV183576937
OOCJ01003138
288878
Fusobacteriota
TGT
Thr
>WENV183576955
OOCJ01003437
183767
Fusobacteriota
TGC
Ala
>WENV183576954
OOCJ01003437
222429
Fusobacteriota
GAT
Ile
>WENV183576956
OOCJ01003437
175943
Fusobacteriota
CAT
Met
>WENV183576970
OOCJ01003680
140772
Fusobacteriota
TAG
Leu
>WENV183576971
OOCJ01003680
175943
Fusobacteriota
CAT
Met
>WENV183576966
OOCJ01003680
295151
Fusobacteriota
TTT
Lys
>WENV183576969
OOCJ01003680
295151
Fusobacteriota
TTT
Lys
>WENV183576964
OOCJ01003680
184469
Fusobacteriota
TGG
Pro
>WENV183576968
OOCJ01003680
295213
Fusobacteriota
GTG
His
>WENV183576987
OOCJ01004248
362179
Fusobacteriota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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