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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183617012
OOEE01028660
166654
Gammaproteobacteria
GAC
Val
>WENV183616853
OOEE01004508
237766
Gammaproteobacteria
TAC
Val
>WENV183616854
OOEE01004508
237766
Gammaproteobacteria
TAC
Val
>WENV183616855
OOEE01004508
237766
Gammaproteobacteria
TAC
Val
>WENV183616856
OOEE01004508
237766
Gammaproteobacteria
TAC
Val
>WENV183617105
OOEE01059252
113631
Gammaproteobacteria
GTA
Tyr
>WENV183617203
OOEE01094172
248041
Gammaproteobacteria
GGC
Ala
>WENV183616733
OOEE01000055
147053
Gammaproteobacteria
GTT
Asn
>WENV183616734
OOEE01000055
147053
Gammaproteobacteria
GTT
Asn
>WENV183616836
OOEE01003550
190137
Gammaproteobacteria
CAT
Met
>WENV183617054
OOEE01041363
190137
Gammaproteobacteria
CAT
Met
>WENV183616803
OOEE01001475
269248
Gammaproteobacteria
CCA
Trp
>WENV183616730
OOEE01000016
191831
Gammaproteobacteria
ACG
Arg
>WENV183617430
OOEE01255880
238511
Gammaproteobacteria
TTT
Lys
>WENV183617148
OOEE01073739
301232
Gammaproteobacteria
TTC
Glu
>WENV183616893
OOEE01007874
412799
Gammaproteobacteria
GCA
Cys
>WENV183616770
OOEE01000677
199268
Gammaproteobacteria
ACG
Arg
>WENV183616799
OOEE01001473
277901
Gammaproteobacteria
TGT
Thr
>WENV183616736
OOEE01000091
277901
Gammaproteobacteria
TGT
Thr
>WENV183616850
OOEE01004389
237412
Gammaproteobacteria
TAC
Val
>WENV183617013
OOEE01028907
145713
Gammaproteobacteria
CAT
Met
>WENV183616844
OOEE01003880
250885
Gammaproteobacteria
TGC
Ala
>WENV183616752
OOEE01000192
301352
Gammaproteobacteria
TGC
Ala
>WENV183616750
OOEE01000192
301352
Gammaproteobacteria
TGC
Ala
>WENV183616785
OOEE01001070
150648
Gammaproteobacteria
TGG
Pro
>WENV183616858
OOEE01004593
113872
Gammaproteobacteria
GTA
Tyr
>WENV183617320
OOEE01172476
270352
Gammaproteobacteria
GCC
Gly
>WENV183617154
OOEE01076125
288001
Gammaproteobacteria
TTG
Gln
>WENV183616771
OOEE01000685
59979
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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