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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183624267
OOGD01000055
237766
Gammaproteobacteria
TAC
Val
>WENV183624268
OOGD01000055
237766
Gammaproteobacteria
TAC
Val
>WENV183624605
OOGD01061516
279385
Gammaproteobacteria
TTT
Lys
>WENV183624608
OOGD01062311
145368
Gammaproteobacteria
CCT
Arg
>WENV183624352
OOGD01002183
281920
Gammaproteobacteria
CCA
Trp
>WENV183624249
OOGD01000009
147053
Gammaproteobacteria
GTT
Asn
>WENV183624250
OOGD01000009
147053
Gammaproteobacteria
GTT
Asn
>WENV183624327
OOGD01001174
269248
Gammaproteobacteria
CCA
Trp
>WENV183624263
OOGD01000051
149036
Gammaproteobacteria
CCA
Trp
>WENV183624339
OOGD01001451
413586
Gammaproteobacteria
GCA
Cys
>WENV183624283
OOGD01000191
412799
Gammaproteobacteria
GCA
Cys
>WENV183624332
OOGD01001318
277901
Gammaproteobacteria
TGT
Thr
>WENV183624252
OOGD01000018
277901
Gammaproteobacteria
TGT
Thr
>WENV183624257
OOGD01000024
148442
Gammaproteobacteria
ACG
Arg
>WENV183624256
OOGD01000024
148442
Gammaproteobacteria
ACG
Arg
>WENV183624338
OOGD01001451
237708
Gammaproteobacteria
GCC
Gly
>WENV183624285
OOGD01000193
237412
Gammaproteobacteria
TAC
Val
>WENV183624299
OOGD01000431
250885
Gammaproteobacteria
TGC
Ala
>WENV183624515
OOGD01025268
186449
Gammaproteobacteria
TGG
Pro
>WENV183624296
OOGD01000397
262546
Gammaproteobacteria
TGC
Ala
>WENV183624574
OOGD01047985
150648
Gammaproteobacteria
TGG
Pro
>WENV183624421
OOGD01008423
150648
Gammaproteobacteria
TGG
Pro
>WENV183624417
OOGD01008423
150648
Gammaproteobacteria
TGG
Pro
>WENV183624592
OOGD01056548
113872
Gammaproteobacteria
GTA
Tyr
>WENV183624403
OOGD01006407
113872
Gammaproteobacteria
GTA
Tyr
>WENV183624544
OOGD01035918
10850
Gammaproteobacteria
TGA
Ser
>WENV183624271
OOGD01000077
10850
Gammaproteobacteria
TGA
Ser
>WENV183624340
OOGD01001451
59979
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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