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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
191 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183704254
PDWI01000117
8615
Gammaproteobacteria
>WENV183709253
PDWI01026021
8615
Gammaproteobacteria
>WENV183710174
PDWI01041018
8615
Gammaproteobacteria
>WENV183715891
PDWI01271055
8615
Gammaproteobacteria
>WENV183704115
PDWI01000037
176662
Gammaproteobacteria
ACG
Arg
>WENV183705055
PDWI01000966
176662
Gammaproteobacteria
ACG
Arg
>WENV183712447
PDWI01100181
178175
Gammaproteobacteria
ACG
Arg
>WENV183707641
PDWI01009637
74110
Gammaproteobacteria
CAA
Leu
>WENV183712487
PDWI01101566
74110
Gammaproteobacteria
CAA
Leu
>WENV183706008
PDWI01002910
178469
Gammaproteobacteria
CAT
Met
>WENV183705493
PDWI01001664
221027
Gammaproteobacteria
CAT
Met
>WENV183707658
PDWI01009714
221027
Gammaproteobacteria
CAT
Met
>WENV183710124
PDWI01039890
181365
Gammaproteobacteria
CAT
Met
>WENV183710184
PDWI01041219
181365
Gammaproteobacteria
CAT
Met
>WENV183710209
PDWI01041722
181365
Gammaproteobacteria
CAT
Met
>WENV183710952
PDWI01057227
181365
Gammaproteobacteria
CAT
Met
>WENV183711260
PDWI01064593
181365
Gammaproteobacteria
CAT
Met
>WENV183711714
PDWI01077957
181365
Gammaproteobacteria
CAT
Met
>WENV183712760
PDWI01113003
181365
Gammaproteobacteria
CAT
Met
>WENV183712903
PDWI01118218
181365
Gammaproteobacteria
CAT
Met
>WENV183713437
PDWI01138613
181365
Gammaproteobacteria
CAT
Met
>WENV183713838
PDWI01155280
181365
Gammaproteobacteria
CAT
Met
>WENV183715724
PDWI01259007
181365
Gammaproteobacteria
CAT
Met
>WENV183705335
PDWI01001405
181365
Gammaproteobacteria
CAT
Met
>WENV183707314
PDWI01007812
181365
Gammaproteobacteria
CAT
Met
>WENV183707425
PDWI01008332
181365
Gammaproteobacteria
CAT
Met
>WENV183709134
PDWI01024312
181365
Gammaproteobacteria
CAT
Met
>WENV183709302
PDWI01026780
181365
Gammaproteobacteria
CAT
Met
>WENV183710088
PDWI01039189
181365
Gammaproteobacteria
CAT
Met
>WENV183715740
PDWI01260146
176518
Gammaproteobacteria
CAT
Met
>WENV183711360
PDWI01067712
190582
Gammaproteobacteria
CAT
Met
>WENV183706946
PDWI01006035
281437
Gammaproteobacteria
CCA
Trp
>WENV183712673
PDWI01109625
281437
Gammaproteobacteria
CCA
Trp
>WENV183714289
PDWI01176407
281437
Gammaproteobacteria
CCA
Trp
>WENV183715514
PDWI01244905
281437
Gammaproteobacteria
CCA
Trp
>WENV183705852
PDWI01002417
209464
Gammaproteobacteria
CCG
Arg
>WENV183704454
PDWI01000262
179889
Gammaproteobacteria
CCT
Arg
>WENV183705124
PDWI01001090
179889
Gammaproteobacteria
CCT
Arg
>WENV183714643
PDWI01196003
283481
Gammaproteobacteria
GAA
Phe
>WENV183715206
PDWI01227483
283481
Gammaproteobacteria
GAA
Phe
>WENV183709354
PDWI01027372
281439
Gammaproteobacteria
GAA
Phe
>WENV183704216
PDWI01000089
280812
Gammaproteobacteria
GAA
Phe
>WENV183704361
PDWI01000179
280812
Gammaproteobacteria
GAA
Phe
>WENV183705705
PDWI01002148
292174
Gammaproteobacteria
GAA
Phe
>WENV183705970
PDWI01002789
346373
Gammaproteobacteria
GAA
Phe
>WENV183715640
PDWI01252398
282776
Gammaproteobacteria
GAA
Phe
>WENV183704073
PDWI01000018
179710
Gammaproteobacteria
GAC
Val
>WENV183704775
PDWI01000623
179710
Gammaproteobacteria
GAC
Val
>WENV183714570
PDWI01191974
178164
Gammaproteobacteria
GAT
Ile
>WENV183712227
PDWI01092830
209813
Gammaproteobacteria
GAT
Ile
>WENV183716113
PDWI01287196
201433
Gammaproteobacteria
GAT
Ile
>WENV183716396
PDWI01305544
201433
Gammaproteobacteria
GAT
Ile
>WENV183716403
PDWI01306250
201433
Gammaproteobacteria
GAT
Ile
>WENV183704732
PDWI01000558
176301
Gammaproteobacteria
GAT
Ile
>WENV183704075
PDWI01000020
487002
Gammaproteobacteria
GCA
Cys
>WENV183705156
PDWI01001145
500085
Gammaproteobacteria
GCA
Cys
>WENV183706969
PDWI01006150
500085
Gammaproteobacteria
GCA
Cys
>WENV183708185
PDWI01013644
500085
Gammaproteobacteria
GCA
Cys
>WENV183708512
PDWI01016911
500085
Gammaproteobacteria
GCA
Cys
>WENV183708736
PDWI01019228
500085
Gammaproteobacteria
GCA
Cys
>WENV183708908
PDWI01021267
500085
Gammaproteobacteria
GCA
Cys
>WENV183709990
PDWI01037719
500085
Gammaproteobacteria
GCA
Cys
>WENV183710338
PDWI01044437
500085
Gammaproteobacteria
GCA
Cys
>WENV183711573
PDWI01073366
500085
Gammaproteobacteria
GCA
Cys
>WENV183712151
PDWI01090526
500085
Gammaproteobacteria
GCA
Cys
>WENV183712217
PDWI01092685
500085
Gammaproteobacteria
GCA
Cys
>WENV183714477
PDWI01185450
500085
Gammaproteobacteria
GCA
Cys
>WENV183714825
PDWI01205383
500085
Gammaproteobacteria
GCA
Cys
>WENV183714908
PDWI01210532
500085
Gammaproteobacteria
GCA
Cys
>WENV183714940
PDWI01212187
500085
Gammaproteobacteria
GCA
Cys
>WENV183715014
PDWI01216983
500085
Gammaproteobacteria
GCA
Cys
>WENV183715586
PDWI01248715
500085
Gammaproteobacteria
GCA
Cys
>WENV183705571
PDWI01001843
480516
Gammaproteobacteria
GCA
Cys
>WENV183708838
PDWI01020396
488965
Gammaproteobacteria
GCA
Cys
>WENV183709401
PDWI01027818
488965
Gammaproteobacteria
GCA
Cys
>WENV183710362
PDWI01045050
488965
Gammaproteobacteria
GCA
Cys
>WENV183714942
PDWI01212213
488965
Gammaproteobacteria
GCA
Cys
>WENV183716200
PDWI01293453
488965
Gammaproteobacteria
GCA
Cys
>WENV183716212
PDWI01294183
488965
Gammaproteobacteria
GCA
Cys
>WENV183708664
PDWI01018502
306288
Gammaproteobacteria
GCC
Gly
>WENV183704594
PDWI01000377
306288
Gammaproteobacteria
GCC
Gly
>WENV183704634
PDWI01000434
306288
Gammaproteobacteria
GCC
Gly
>WENV183705076
PDWI01000996
306288
Gammaproteobacteria
GCC
Gly
>WENV183708278
PDWI01014352
306288
Gammaproteobacteria
GCC
Gly
>WENV183710125
PDWI01039925
306288
Gammaproteobacteria
GCC
Gly
>WENV183710511
PDWI01047932
306288
Gammaproteobacteria
GCC
Gly
>WENV183712635
PDWI01107757
306288
Gammaproteobacteria
GCC
Gly
>WENV183713999
PDWI01163215
306288
Gammaproteobacteria
GCC
Gly
>WENV183714310
PDWI01177396
306288
Gammaproteobacteria
GCC
Gly
>WENV183713393
PDWI01136599
31109
Gammaproteobacteria
GGA
Ser
>WENV183714480
PDWI01186033
31109
Gammaproteobacteria
GGA
Ser
>WENV183709050
PDWI01023320
29720
Gammaproteobacteria
GGA
Ser
>WENV183707696
PDWI01009992
281276
Gammaproteobacteria
GGT
Thr
>WENV183707312
PDWI01007805
296672
Gammaproteobacteria
GGT
Thr
>WENV183710568
PDWI01049321
226555
Gammaproteobacteria
GTC
Asp
>WENV183706388
PDWI01004045
302377
Gammaproteobacteria
GTT
Asn
>WENV183715358
PDWI01235317
302377
Gammaproteobacteria
GTT
Asn
>WENV183713323
PDWI01134232
73544
Gammaproteobacteria
TAA
Leu
>WENV183704086
PDWI01000025
73687
Gammaproteobacteria
TAA
Leu
>WENV183707292
PDWI01007754
285837
Gammaproteobacteria
TAC
Val
>WENV183707293
PDWI01007754
285837
Gammaproteobacteria
TAC
Val
>WENV183706167
PDWI01003331
282550
Gammaproteobacteria
TAC
Val
>WENV183707307
PDWI01007805
121754
Gammaproteobacteria
TAG
Leu
>WENV183707624
PDWI01009447
126986
Gammaproteobacteria
TAG
Leu
>WENV183707646
PDWI01009658
197551
Gammaproteobacteria
TCT
Arg
>WENV183711968
PDWI01084952
317792
Gammaproteobacteria
TGC
Ala
>WENV183714423
PDWI01183002
317792
Gammaproteobacteria
TGC
Ala
>WENV183716112
PDWI01287196
317792
Gammaproteobacteria
TGC
Ala
>WENV183716395
PDWI01305544
317792
Gammaproteobacteria
TGC
Ala
>WENV183704920
PDWI01000783
229289
Gammaproteobacteria
TGG
Pro
>WENV183705581
PDWI01001860
229289
Gammaproteobacteria
TGG
Pro
>WENV183709582
PDWI01030514
176791
Gammaproteobacteria
TGG
Pro
>WENV183705332
PDWI01001401
179186
Gammaproteobacteria
TGG
Pro
>WENV183705648
PDWI01002033
179186
Gammaproteobacteria
TGG
Pro
>WENV183707110
PDWI01006789
179186
Gammaproteobacteria
TGG
Pro
>WENV183707699
PDWI01010004
179186
Gammaproteobacteria
TGG
Pro
>WENV183710761
PDWI01053096
179186
Gammaproteobacteria
TGG
Pro
>WENV183710960
PDWI01057342
179186
Gammaproteobacteria
TGG
Pro
>WENV183712450
PDWI01100334
179186
Gammaproteobacteria
TGG
Pro
>WENV183715279
PDWI01230974
179186
Gammaproteobacteria
TGG
Pro
>WENV183716247
PDWI01297054
179186
Gammaproteobacteria
TGG
Pro
>WENV183705337
PDWI01001409
201377
Gammaproteobacteria
TGG
Pro
>WENV183707645
PDWI01009658
201377
Gammaproteobacteria
TGG
Pro
>WENV183710533
PDWI01048447
296670
Gammaproteobacteria
TGT
Thr
>WENV183705006
PDWI01000880
282902
Gammaproteobacteria
TGT
Thr
>WENV183715548
PDWI01246326
282902
Gammaproteobacteria
TGT
Thr
>WENV183704592
PDWI01000377
284039
Gammaproteobacteria
TTC
Glu
>WENV183705077
PDWI01000996
284039
Gammaproteobacteria
TTC
Glu
>WENV183705123
PDWI01001089
284039
Gammaproteobacteria
TTC
Glu
>WENV183705676
PDWI01002068
284039
Gammaproteobacteria
TTC
Glu
>WENV183706361
PDWI01003910
284039
Gammaproteobacteria
TTC
Glu
>WENV183706362
PDWI01003910
284039
Gammaproteobacteria
TTC
Glu
>WENV183706905
PDWI01005925
284039
Gammaproteobacteria
TTC
Glu
>WENV183706906
PDWI01005925
284039
Gammaproteobacteria
TTC
Glu
>WENV183707528
PDWI01008874
284039
Gammaproteobacteria
TTC
Glu
>WENV183707529
PDWI01008874
284039
Gammaproteobacteria
TTC
Glu
>WENV183710622
PDWI01050270
284039
Gammaproteobacteria
TTC
Glu
>WENV183710623
PDWI01050270
284039
Gammaproteobacteria
TTC
Glu
>WENV183710964
PDWI01057436
284039
Gammaproteobacteria
TTC
Glu
>WENV183711275
PDWI01065013
284039
Gammaproteobacteria
TTC
Glu
>WENV183712350
PDWI01096903
284039
Gammaproteobacteria
TTC
Glu
>WENV183712351
PDWI01096903
284039
Gammaproteobacteria
TTC
Glu
>WENV183712546
PDWI01103788
284039
Gammaproteobacteria
TTC
Glu
>WENV183713435
PDWI01138582
284039
Gammaproteobacteria
TTC
Glu
>WENV183713436
PDWI01138582
284039
Gammaproteobacteria
TTC
Glu
>WENV183713510
PDWI01141191
284039
Gammaproteobacteria
TTC
Glu
>WENV183713511
PDWI01141191
284039
Gammaproteobacteria
TTC
Glu
>WENV183713722
PDWI01150370
284039
Gammaproteobacteria
TTC
Glu
>WENV183714045
PDWI01165201
284039
Gammaproteobacteria
TTC
Glu
>WENV183714046
PDWI01165201
284039
Gammaproteobacteria
TTC
Glu
>WENV183714867
PDWI01207334
284039
Gammaproteobacteria
TTC
Glu
>WENV183714871
PDWI01207435
284039
Gammaproteobacteria
TTC
Glu
>WENV183714915
PDWI01211035
284039
Gammaproteobacteria
TTC
Glu
>WENV183715166
PDWI01225020
284039
Gammaproteobacteria
TTC
Glu
>WENV183715167
PDWI01225020
284039
Gammaproteobacteria
TTC
Glu
>WENV183715229
PDWI01228947
284039
Gammaproteobacteria
TTC
Glu
>WENV183715987
PDWI01278226
284039
Gammaproteobacteria
TTC
Glu
>WENV183716029
PDWI01281384
284039
Gammaproteobacteria
TTC
Glu
>WENV183716306
PDWI01300228
284039
Gammaproteobacteria
TTC
Glu
>WENV183716307
PDWI01300228
284039
Gammaproteobacteria
TTC
Glu
>WENV183714638
PDWI01195432
347008
Gammaproteobacteria
TTC
Glu
>WENV183715320
PDWI01233234
347008
Gammaproteobacteria
TTC
Glu
>WENV183715574
PDWI01248222
347008
Gammaproteobacteria
TTC
Glu
>WENV183716246
PDWI01296853
347008
Gammaproteobacteria
TTC
Glu
>WENV183707910
PDWI01011442
347008
Gammaproteobacteria
TTC
Glu
>WENV183709897
PDWI01035891
347008
Gammaproteobacteria
TTC
Glu
>WENV183710244
PDWI01042353
347008
Gammaproteobacteria
TTC
Glu
>WENV183711009
PDWI01058804
347008
Gammaproteobacteria
TTC
Glu
>WENV183711355
PDWI01067552
347008
Gammaproteobacteria
TTC
Glu
>WENV183712193
PDWI01091740
347008
Gammaproteobacteria
TTC
Glu
>WENV183713261
PDWI01131206
347008
Gammaproteobacteria
TTC
Glu
>WENV183713759
PDWI01151664
347008
Gammaproteobacteria
TTC
Glu
>WENV183714254
PDWI01175381
347008
Gammaproteobacteria
TTC
Glu
>WENV183714314
PDWI01177472
347008
Gammaproteobacteria
TTC
Glu
>WENV183705953
PDWI01002730
281432
Gammaproteobacteria
TTG
Gln
>WENV183705954
PDWI01002730
281432
Gammaproteobacteria
TTG
Gln
>WENV183711885
PDWI01083165
304066
Gammaproteobacteria
TTT
Lys
>WENV183704071
PDWI01000018
290068
Gammaproteobacteria
TTT
Lys
>WENV183704072
PDWI01000018
290068
Gammaproteobacteria
TTT
Lys
>WENV183704773
PDWI01000623
290068
Gammaproteobacteria
TTT
Lys
>WENV183704064
PDWI01000017
283282
Gammaproteobacteria
TTT
Lys
>WENV183705249
PDWI01001268
283282
Gammaproteobacteria
TTT
Lys
>WENV183707545
PDWI01008969
283282
Gammaproteobacteria
TTT
Lys
>WENV183707546
PDWI01008969
283282
Gammaproteobacteria
TTT
Lys
>WENV183711556
PDWI01072944
283282
Gammaproteobacteria
TTT
Lys
>WENV183711557
PDWI01072944
283282
Gammaproteobacteria
TTT
Lys
>WENV183712152
PDWI01090606
283282
Gammaproteobacteria
TTT
Lys
>WENV183713015
PDWI01121625
283282
Gammaproteobacteria
TTT
Lys
>WENV183713401
PDWI01137128
283282
Gammaproteobacteria
TTT
Lys
>WENV183715583
PDWI01248609
283282
Gammaproteobacteria
TTT
Lys
>WENV183705212
PDWI01001221
281939
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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