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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183731943
PJTU01000015
7214
Gammaproteobacteria
GCT
Ser
>WENV183731981
PJTU01000173
144827
Gammaproteobacteria
GAC
Val
>WENV183731922
PJTU01000009
412176
Gammaproteobacteria
CCC
Gly
>WENV183732024
PJTU01002332
162321
Gammaproteobacteria
CAT
Met
>WENV183732031
PJTU01002820
162321
Gammaproteobacteria
CAT
Met
>WENV183731888
PJTU01000002
182303
Gammaproteobacteria
GTG
His
>WENV183731941
PJTU01000014
266908
Gammaproteobacteria
CGC
Ala
>WENV183732032
PJTU01002820
371820
Gammaproteobacteria
>WENV183731904
PJTU01000005
353410
Gammaproteobacteria
CTG
Gln
>WENV183731882
PJTU01000002
16238
Gammaproteobacteria
CGA
Ser
>WENV183731929
PJTU01000012
261213
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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