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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183710109
PDWI01039628
197523
Thermodesulfobacteriota
CAC
Val
>WENV183710892
PDWI01055809
83851
Thermodesulfobacteriota
CAG
Leu
>WENV183707288
PDWI01007734
304145
Thermodesulfobacteriota
CAT
Met
>WENV183707764
PDWI01010498
198566
Thermodesulfobacteriota
CGG
Pro
>WENV183709461
PDWI01028411
304141
Thermodesulfobacteriota
CTC
Glu
>WENV183709625
PDWI01031122
304141
Thermodesulfobacteriota
CTC
Glu
>WENV183706209
PDWI01003437
304140
Thermodesulfobacteriota
CTT
Lys
>WENV183706046
PDWI01002978
289834
Thermodesulfobacteriota
GAA
Phe
>WENV183708966
PDWI01021902
289834
Thermodesulfobacteriota
GAA
Phe
>WENV183707103
PDWI01006697
413601
Thermodesulfobacteriota
GAC
Val
>WENV183706630
PDWI01004891
403835
Thermodesulfobacteriota
GAC
Val
>WENV183706937
PDWI01006005
77857
Thermodesulfobacteriota
GAG
Leu
>WENV183706868
PDWI01005781
413602
Thermodesulfobacteriota
GCA
Cys
>WENV183715254
PDWI01229798
288993
Thermodesulfobacteriota
GGC
Ala
>WENV183707705
PDWI01010041
304139
Thermodesulfobacteriota
GGC
Ala
>WENV183712289
PDWI01094769
121639
Thermodesulfobacteriota
GTA
Tyr
>WENV183707586
PDWI01009202
337389
Thermodesulfobacteriota
GTG
His
>WENV183704287
PDWI01000134
326905
Thermodesulfobacteriota
TAC
Val
>WENV183704289
PDWI01000134
326905
Thermodesulfobacteriota
TAC
Val
>WENV183708564
PDWI01017428
326905
Thermodesulfobacteriota
TAC
Val
>WENV183708877
PDWI01020882
304142
Thermodesulfobacteriota
TGC
Ala
>WENV183706374
PDWI01003969
159099
Thermodesulfobacteriota
TTC
Glu
>WENV183709224
PDWI01025611
159099
Thermodesulfobacteriota
TTC
Glu
>WENV183712324
PDWI01095638
302246
Thermodesulfobacteriota
TTG
Gln
>WENV183709624
PDWI01031122
295271
Thermodesulfobacteriota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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