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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183716457
PDWJ01000011
326905
Thermodesulfobacteriota
TAC
Val
>WENV183716459
PDWJ01000011
326905
Thermodesulfobacteriota
TAC
Val
>WENV183717290
PDWJ01000695
403835
Thermodesulfobacteriota
GAC
Val
>WENV183717957
PDWJ01002047
83851
Thermodesulfobacteriota
CAG
Leu
>WENV183718065
PDWJ01002296
288993
Thermodesulfobacteriota
GGC
Ala
>WENV183718282
PDWJ01003191
302246
Thermodesulfobacteriota
TTG
Gln
>WENV183718706
PDWJ01005979
403835
Thermodesulfobacteriota
GAC
Val
>WENV183718813
PDWJ01006665
295271
Thermodesulfobacteriota
TTT
Lys
>WENV183719305
PDWJ01012105
288993
Thermodesulfobacteriota
GGC
Ala
>WENV183719482
PDWJ01014888
302246
Thermodesulfobacteriota
TTG
Gln
>WENV183720693
PDWJ01041816
295271
Thermodesulfobacteriota
TTT
Lys
>WENV183720862
PDWJ01047642
326905
Thermodesulfobacteriota
TAC
Val
>WENV183721321
PDWJ01064237
77857
Thermodesulfobacteriota
GAG
Leu
>WENV183721534
PDWJ01073991
288993
Thermodesulfobacteriota
GGC
Ala
>WENV183721804
PDWJ01088312
413602
Thermodesulfobacteriota
GCA
Cys
>WENV183721987
PDWJ01098271
289834
Thermodesulfobacteriota
GAA
Phe
>WENV183722173
PDWJ01110192
295271
Thermodesulfobacteriota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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