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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183638467
OQVI01000004
97755
Verrucomicrobiota
TAG
Leu
>WENV183638466
OQVI01000004
345110
Verrucomicrobiota
CCT
Arg
>WENV183638470
OQVI01000006
345141
Verrucomicrobiota
TTG
Gln
>WENV183638487
OQVI01000031
119661
Verrucomicrobiota
CAA
Leu
>WENV183638500
OQVI01000046
344845
Verrucomicrobiota
CTG
Gln
>WENV183638499
OQVI01000046
128202
Verrucomicrobiota
GTC
Asp
>WENV183638506
OQVI01000056
17023
Verrucomicrobiota
GGA
Ser
>WENV183638540
OQVI01000099
368497
Verrucomicrobiota
GCC
Gly
>WENV183638571
OQVI01000122
246700
Verrucomicrobiota
TTC
Glu
>WENV183638572
OQVI01000122
344839
Verrucomicrobiota
GTG
His
>WENV183638570
OQVI01000122
368497
Verrucomicrobiota
GCC
Gly
>WENV183638573
OQVI01000122
246709
Verrucomicrobiota
CAT
Met
>WENV183638578
OQVI01000130
46246
Verrucomicrobiota
TGA
Ser
>WENV183638577
OQVI01000130
345115
Verrucomicrobiota
CAT
Met
>WENV183638584
OQVI01000140
82056
Verrucomicrobiota
TAA
Leu
>WENV183638585
OQVI01000140
246260
Verrucomicrobiota
>WENV183638586
OQVI01000140
7256
Verrucomicrobiota
GCT
Ser
>WENV183638588
OQVI01000142
128202
Verrucomicrobiota
GTC
Asp
>WENV183638614
OQVI01000199
170105
Verrucomicrobiota
CAT
Met
>WENV183638617
OQVI01000207
287733
Verrucomicrobiota
CCA
Trp
>WENV183638616
OQVI01000207
344751
Verrucomicrobiota
GGT
Thr
>WENV183638619
OQVI01000209
155268
Verrucomicrobiota
CGG
Pro
>WENV183638635
OQVI01000272
82054
Verrucomicrobiota
GTA
Tyr
>WENV183638656
OQVI01000294
345133
Verrucomicrobiota
GAC
Val
>WENV183638655
OQVI01000294
345119
Verrucomicrobiota
TAC
Val
>WENV183638671
OQVI01000316
345123
Verrucomicrobiota
TGT
Thr
>WENV183638673
OQVI01000317
246677
Verrucomicrobiota
CTT
Lys
>WENV183638672
OQVI01000317
344842
Verrucomicrobiota
CGT
Thr
>WENV183638679
OQVI01000326
60880
Verrucomicrobiota
CAG
Leu
>WENV183638681
OQVI01000328
344841
Verrucomicrobiota
CAC
Val
>WENV183638709
OQVI01000451
246687
Verrucomicrobiota
CGC
Ala
>WENV183638710
OQVI01000458
7274
Verrucomicrobiota
CGA
Ser
>WENV183638731
OQVI01000522
155256
Verrucomicrobiota
TCT
Arg
>WENV183638734
OQVI01000529
155264
Verrucomicrobiota
GGG
Pro
>WENV183638732
OQVI01000529
246728
Verrucomicrobiota
GAA
Phe
>WENV183638733
OQVI01000529
154693
Verrucomicrobiota
TGG
Pro
>WENV183638747
OQVI01000588
246700
Verrucomicrobiota
TTC
Glu
>WENV183638751
OQVI01000636
344844
Verrucomicrobiota
GCA
Cys
>WENV183638810
OQVI01000903
345124
Verrucomicrobiota
GTT
Asn
>WENV183638873
OQVI01001305
246700
Verrucomicrobiota
TTC
Glu
>WENV183638874
OQVI01001307
246701
Verrucomicrobiota
TTT
Lys
>WENV183638898
OQVI01001521
414625
Verrucomicrobiota
CCC
Gly
>WENV183638897
OQVI01001521
419909
Verrucomicrobiota
TCC
Gly
>WENV183639060
OQVI01003244
82181
Verrucomicrobiota
AAG
Leu
>WENV183639085
OQVI01003691
345142
Verrucomicrobiota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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