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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183654883
OQWD01001664
155256
Verrucomicrobiota
TCT
Arg
>WENV183654954
OQWD01002359
246701
Verrucomicrobiota
TTT
Lys
>WENV183655052
OQWD01004639
345141
Verrucomicrobiota
TTG
Gln
>WENV183654721
OQWD01000407
345133
Verrucomicrobiota
GAC
Val
>WENV183654963
OQWD01002450
82054
Verrucomicrobiota
GTA
Tyr
>WENV183654977
OQWD01002945
246677
Verrucomicrobiota
CTT
Lys
>WENV183654978
OQWD01002945
246677
Verrucomicrobiota
CTT
Lys
>WENV183654806
OQWD01000875
344844
Verrucomicrobiota
GCA
Cys
>WENV183655003
OQWD01003604
155264
Verrucomicrobiota
GGG
Pro
>WENV183655046
OQWD01004468
344845
Verrucomicrobiota
CTG
Gln
>WENV183654821
OQWD01000983
128202
Verrucomicrobiota
GTC
Asp
>WENV183654709
OQWD01000346
414625
Verrucomicrobiota
CCC
Gly
>WENV183655224
OQWD01009374
46246
Verrucomicrobiota
TGA
Ser
>WENV183654772
OQWD01000637
97755
Verrucomicrobiota
TAG
Leu
>WENV183654807
OQWD01000875
246700
Verrucomicrobiota
TTC
Glu
>WENV183654809
OQWD01000905
246687
Verrucomicrobiota
CGC
Ala
>WENV183654708
OQWD01000346
419909
Verrucomicrobiota
TCC
Gly
>WENV183654955
OQWD01002364
344841
Verrucomicrobiota
CAC
Val
>WENV183654919
OQWD01002024
405704
Verrucomicrobiota
GCC
Gly
>WENV183654753
OQWD01000538
405704
Verrucomicrobiota
GCC
Gly
>WENV183654785
OQWD01000710
60880
Verrucomicrobiota
CAG
Leu
>WENV183654827
OQWD01001012
82056
Verrucomicrobiota
TAA
Leu
>WENV183654976
OQWD01002945
344842
Verrucomicrobiota
CGT
Thr
>WENV183654695
OQWD01000293
170105
Verrucomicrobiota
CAT
Met
>WENV183654966
OQWD01002572
287733
Verrucomicrobiota
CCA
Trp
>WENV183654646
OQWD01000136
345123
Verrucomicrobiota
TGT
Thr
>WENV183654650
OQWD01000159
345110
Verrucomicrobiota
CCT
Arg
>WENV183655256
OQWD01010046
344839
Verrucomicrobiota
GTG
His
>WENV183654628
OQWD01000082
7274
Verrucomicrobiota
CGA
Ser
>WENV183654828
OQWD01001012
246260
Verrucomicrobiota
>WENV183654671
OQWD01000207
155268
Verrucomicrobiota
CGG
Pro
>WENV183654633
OQWD01000093
82181
Verrucomicrobiota
AAG
Leu
>WENV183654794
OQWD01000793
246728
Verrucomicrobiota
GAA
Phe
>WENV183654814
OQWD01000939
7256
Verrucomicrobiota
GCT
Ser
>WENV183654808
OQWD01000895
345115
Verrucomicrobiota
CAT
Met
>WENV183655184
OQWD01007877
345119
Verrucomicrobiota
TAC
Val
>WENV183654859
OQWD01001318
345124
Verrucomicrobiota
GTT
Asn
>WENV183655021
OQWD01003850
17023
Verrucomicrobiota
GGA
Ser
>WENV183655141
OQWD01006649
345142
Verrucomicrobiota
CCG
Arg
>WENV183655425
OQWD01018196
246709
Verrucomicrobiota
CAT
Met
>WENV183654795
OQWD01000793
154693
Verrucomicrobiota
TGG
Pro
>WENV183654798
OQWD01000807
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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