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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV085609
BABD01002180
451336
Bacillota
GAA
Phe
>WENV085737
BABD01009285
458652
Bacillota
GCC
Gly
>WENV085580
BABD01001344
275710
Bacillota
CCG
Arg
>WENV085632
BABD01003199
455828
Bacillota
TAC
Val
>WENV085811
BABD01015560
653346
Bacillota
TTC
Glu
>WENV085827
BABD01018074
86860
Bacillota
TGA
Ser
>WENV085828
BABD01018074
8223
Bacillota
GCT
Ser
>WENV085532
BABD01000578
451373
Bacillota
TTT
Lys
>WENV085780
BABD01011977
270426
Bacillota
GAT
Ile
>WENV085944
BABD01036269
279224
Bacillota
GAT
Ile
>WENV085729
BABD01008973
270438
Bacillota
TCT
Arg
>WENV085769
BABD01010432
465093
Bacillota
GCC
Gly
>WENV085676
BABD01005360
153689
Bacillota
GTA
Tyr
>WENV085685
BABD01005669
86865
Bacillota
AAG
Leu
>WENV085535
BABD01000578
179909
Bacillota
GTA
Tyr
>WENV085571
BABD01001008
179909
Bacillota
GTA
Tyr
>WENV085523
BABD01000488
451357
Bacillota
CTT
Lys
>WENV085563
BABD01000827
451357
Bacillota
CTT
Lys
>WENV085590
BABD01001592
451406
Bacillota
CTT
Lys
>WENV085630
BABD01003115
451406
Bacillota
CTT
Lys
>WENV085812
BABD01015560
270546
Bacillota
CAT
Met
>WENV085757
BABD01009909
20504
Bacillota
GGA
Ser
>WENV085711
BABD01007524
656246
Bacillota
TTC
Glu
>WENV085931
BABD01035588
451384
Bacillota
TGG
Pro
>WENV085808
BABD01015137
467075
Bacillota
TGC
Ala
>WENV085746
BABD01009563
466773
Bacillota
GGC
Ala
>WENV085844
BABD01019704
451375
Bacillota
GGC
Ala
>WENV085765
BABD01010126
270447
Bacillota
GTT
Asn
>WENV085522
BABD01000488
653369
Bacillota
CTC
Glu
>WENV085691
BABD01006366
270399
Bacillota
GAT
Ile
>WENV085610
BABD01002180
451376
Bacillota
GCC
Gly
>WENV085692
BABD01006366
451344
Bacillota
TGC
Ala
>WENV085766
BABD01010209
451344
Bacillota
TGC
Ala
>WENV085785
BABD01012365
451334
Bacillota
TGT
Thr
>WENV085605
BABD01002067
270405
Bacillota
ACG
Arg
>WENV085654
BABD01003866
284784
Bacillota
GAT
Ile
>WENV085876
BABD01024301
284784
Bacillota
GAT
Ile
>WENV085533
BABD01000578
451372
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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