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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170077993
CDZV01004883
154983
Bacteroidota
GTA
Tyr
>WENV170079143
CDZV01053160
86857
Bacteroidota
TAA
Leu
>WENV170077876
CDZV01000900
281406
Bacteroidota
GGC
Ala
>WENV170078105
CDZV01009975
654770
Bacteroidota
GGT
Thr
>WENV170078212
CDZV01014048
113533
Bacteroidota
CAG
Leu
>WENV170078110
CDZV01010192
281835
Bacteroidota
TGT
Thr
>WENV170078942
CDZV01044362
779388
Bacteroidota
CTG
Gln
>WENV170078064
CDZV01008228
30278
Bacteroidota
GGA
Ser
>WENV170079147
CDZV01053578
270492
Bacteroidota
GTG
His
>WENV170078362
CDZV01021411
451360
Bacteroidota
CGT
Thr
>WENV170078446
CDZV01025692
153684
Bacteroidota
GTA
Tyr
>WENV170078667
CDZV01034719
783463
Bacteroidota
CTG
Gln
>WENV170078833
CDZV01041218
783463
Bacteroidota
CTG
Gln
>WENV170078952
CDZV01044672
273124
Bacteroidota
GTC
Asp
>WENV170078331
CDZV01019976
180313
Bacteroidota
TAG
Leu
>WENV170078028
CDZV01007274
86859
Bacteroidota
TGA
Ser
>WENV170079066
CDZV01050419
86859
Bacteroidota
TGA
Ser
>WENV170078583
CDZV01031862
270514
Bacteroidota
GTT
Asn
>WENV170078584
CDZV01031862
270514
Bacteroidota
GTT
Asn
>WENV170078585
CDZV01031862
270514
Bacteroidota
GTT
Asn
>WENV170078586
CDZV01031862
270514
Bacteroidota
GTT
Asn
>WENV170078587
CDZV01031862
270514
Bacteroidota
GTT
Asn
>WENV170078588
CDZV01031862
270514
Bacteroidota
GTT
Asn
>WENV170078589
CDZV01031862
270514
Bacteroidota
GTT
Asn
>WENV170079183
CDZV01055389
270514
Bacteroidota
GTT
Asn
>WENV170079184
CDZV01055389
270514
Bacteroidota
GTT
Asn
>WENV170079185
CDZV01055389
270514
Bacteroidota
GTT
Asn
>WENV170079186
CDZV01055389
270514
Bacteroidota
GTT
Asn
>WENV170077889
CDZV01001359
451389
Bacteroidota
GCC
Gly
>WENV170077891
CDZV01001359
451389
Bacteroidota
GCC
Gly
>WENV170078054
CDZV01007779
451389
Bacteroidota
GCC
Gly
>WENV170078268
CDZV01016037
451389
Bacteroidota
GCC
Gly
>WENV170078319
CDZV01018694
451389
Bacteroidota
GCC
Gly
>WENV170079303
CDZV01060497
451389
Bacteroidota
GCC
Gly
>WENV170078663
CDZV01034349
179905
Bacteroidota
TAG
Leu
>WENV170079107
CDZV01051877
451431
Bacteroidota
CCA
Trp
>WENV170078236
CDZV01014697
277204
Bacteroidota
GTC
Asp
>WENV170078161
CDZV01012199
240600
Bacteroidota
GGG
Pro
>WENV170078091
CDZV01009587
779393
Bacteroidota
TTG
Gln
>WENV170079089
CDZV01051699
779393
Bacteroidota
TTG
Gln
>WENV170078113
CDZV01010223
279189
Bacteroidota
GTT
Asn
>WENV170078203
CDZV01013573
270494
Bacteroidota
CGG
Pro
>WENV170079092
CDZV01051748
270494
Bacteroidota
CGG
Pro
>WENV170079215
CDZV01056739
782347
Bacteroidota
CTG
Gln
>WENV170078454
CDZV01025747
270471
Bacteroidota
GGC
Ala
>WENV170078217
CDZV01014253
270491
Bacteroidota
GGC
Ala
>WENV170078660
CDZV01034025
270491
Bacteroidota
GGC
Ala
>WENV170078287
CDZV01016438
451484
Bacteroidota
CAT
Met
>WENV170078076
CDZV01009185
463028
Bacteroidota
CAT
Met
>WENV170078365
CDZV01021489
463028
Bacteroidota
CAT
Met
>WENV170078360
CDZV01021042
653774
Bacteroidota
CAT
Met
>WENV170078916
CDZV01043695
653774
Bacteroidota
CAT
Met
>WENV170077960
CDZV01002934
153692
Bacteroidota
GTA
Tyr
>WENV170078238
CDZV01014697
153692
Bacteroidota
GTA
Tyr
>WENV170078954
CDZV01044673
153692
Bacteroidota
GTA
Tyr
>WENV170078477
CDZV01026726
270851
Bacteroidota
TCT
Arg
>WENV170078844
CDZV01041751
467914
Bacteroidota
GCC
Gly
>WENV170079024
CDZV01047453
467914
Bacteroidota
GCC
Gly
>WENV170078254
CDZV01015540
653377
Bacteroidota
CTC
Glu
>WENV170078662
CDZV01034278
653350
Bacteroidota
GCA
Cys
>WENV170078024
CDZV01006775
270497
Bacteroidota
GTG
His
>WENV170078025
CDZV01006775
270497
Bacteroidota
GTG
His
>WENV170078805
CDZV01040003
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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