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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170087119
CEAC01032042
154983
Bacteroidota
GTA
Tyr
>WENV170086218
CEAC01000341
86857
Bacteroidota
TAA
Leu
>WENV170087244
CEAC01036670
86857
Bacteroidota
TAA
Leu
>WENV170086480
CEAC01009929
281406
Bacteroidota
GGC
Ala
>WENV170086231
CEAC01000956
270542
Bacteroidota
CAT
Met
>WENV170086603
CEAC01013906
270412
Bacteroidota
GTT
Asn
>WENV170086604
CEAC01013906
270412
Bacteroidota
GTT
Asn
>WENV170087008
CEAC01028743
270412
Bacteroidota
GTT
Asn
>WENV170087009
CEAC01028743
270412
Bacteroidota
GTT
Asn
>WENV170086379
CEAC01006798
451354
Bacteroidota
TTT
Lys
>WENV170086684
CEAC01017444
451354
Bacteroidota
TTT
Lys
>WENV170087131
CEAC01032366
451354
Bacteroidota
TTT
Lys
>WENV170086936
CEAC01027165
113533
Bacteroidota
CAG
Leu
>WENV170087205
CEAC01035659
281835
Bacteroidota
TGT
Thr
>WENV170086785
CEAC01021243
240966
Bacteroidota
TAC
Val
>WENV170087120
CEAC01032054
240966
Bacteroidota
TAC
Val
>WENV170087307
CEAC01039500
451478
Bacteroidota
TTT
Lys
>WENV170087352
CEAC01040837
284758
Bacteroidota
GAT
Ile
>WENV170086571
CEAC01012963
87355
Bacteroidota
TGA
Ser
>WENV170086903
CEAC01025475
87355
Bacteroidota
TGA
Ser
>WENV170087215
CEAC01036288
87355
Bacteroidota
TGA
Ser
>WENV170086601
CEAC01013899
30278
Bacteroidota
GGA
Ser
>WENV170086970
CEAC01028051
218000
Bacteroidota
CAG
Leu
>WENV170086973
CEAC01028051
218000
Bacteroidota
CAG
Leu
>WENV170086976
CEAC01028051
218000
Bacteroidota
CAG
Leu
>WENV170086573
CEAC01012963
218000
Bacteroidota
CAG
Leu
>WENV170086576
CEAC01012963
218000
Bacteroidota
CAG
Leu
>WENV170086351
CEAC01005616
270492
Bacteroidota
GTG
His
>WENV170087369
CEAC01041220
270492
Bacteroidota
GTG
His
>WENV170086758
CEAC01020566
281318
Bacteroidota
GTT
Asn
>WENV170086801
CEAC01021582
281318
Bacteroidota
GTT
Asn
>WENV170087170
CEAC01034338
281318
Bacteroidota
GTT
Asn
>WENV170087171
CEAC01034338
281318
Bacteroidota
GTT
Asn
>WENV170087172
CEAC01034338
281318
Bacteroidota
GTT
Asn
>WENV170087236
CEAC01036663
451360
Bacteroidota
CGT
Thr
>WENV170086535
CEAC01011294
153684
Bacteroidota
GTA
Tyr
>WENV170087011
CEAC01028743
153684
Bacteroidota
GTA
Tyr
>WENV170086846
CEAC01023129
783463
Bacteroidota
CTG
Gln
>WENV170086822
CEAC01022289
273124
Bacteroidota
GTC
Asp
>WENV170087196
CEAC01035340
273124
Bacteroidota
GTC
Asp
>WENV170087303
CEAC01039194
273124
Bacteroidota
GTC
Asp
>WENV170086262
CEAC01002108
180313
Bacteroidota
TAG
Leu
>WENV170087220
CEAC01036289
452487
Bacteroidota
CCA
Trp
>WENV170087081
CEAC01030520
86859
Bacteroidota
TGA
Ser
>WENV170087280
CEAC01037762
86859
Bacteroidota
TGA
Ser
>WENV170086899
CEAC01025457
270514
Bacteroidota
GTT
Asn
>WENV170087089
CEAC01030818
179905
Bacteroidota
TAG
Leu
>WENV170086319
CEAC01004044
660446
Bacteroidota
CCT
Arg
>WENV170087004
CEAC01028693
270418
Bacteroidota
GGC
Ala
>WENV170086315
CEAC01004012
451431
Bacteroidota
CCA
Trp
>WENV170086477
CEAC01009728
240600
Bacteroidota
GGG
Pro
>WENV170086510
CEAC01010368
240600
Bacteroidota
GGG
Pro
>WENV170087305
CEAC01039239
240600
Bacteroidota
GGG
Pro
>WENV170086674
CEAC01017031
779393
Bacteroidota
TTG
Gln
>WENV170086859
CEAC01023682
779393
Bacteroidota
TTG
Gln
>WENV170087132
CEAC01032375
779393
Bacteroidota
TTG
Gln
>WENV170087348
CEAC01040836
279189
Bacteroidota
GTT
Asn
>WENV170087349
CEAC01040836
279189
Bacteroidota
GTT
Asn
>WENV170087350
CEAC01040836
279189
Bacteroidota
GTT
Asn
>WENV170087351
CEAC01040836
279189
Bacteroidota
GTT
Asn
>WENV170086639
CEAC01015192
270494
Bacteroidota
CGG
Pro
>WENV170087304
CEAC01039239
782347
Bacteroidota
CTG
Gln
>WENV170087175
CEAC01034360
270471
Bacteroidota
GGC
Ala
>WENV170086342
CEAC01005250
270491
Bacteroidota
GGC
Ala
>WENV170086397
CEAC01007134
270491
Bacteroidota
GGC
Ala
>WENV170086625
CEAC01015112
451484
Bacteroidota
CAT
Met
>WENV170087262
CEAC01037407
451484
Bacteroidota
CAT
Met
>WENV170087321
CEAC01040121
451484
Bacteroidota
CAT
Met
>WENV170087322
CEAC01040121
451484
Bacteroidota
CAT
Met
>WENV170087245
CEAC01036670
653343
Bacteroidota
CCT
Arg
>WENV170087115
CEAC01031702
466831
Bacteroidota
GCC
Gly
>WENV170087116
CEAC01031702
466831
Bacteroidota
GCC
Gly
>WENV170087289
CEAC01038146
466831
Bacteroidota
GCC
Gly
>WENV170087225
CEAC01036294
463028
Bacteroidota
CAT
Met
>WENV170087293
CEAC01038700
463028
Bacteroidota
CAT
Met
>WENV170086806
CEAC01021893
653774
Bacteroidota
CAT
Met
>WENV170087063
CEAC01029749
653774
Bacteroidota
CAT
Met
>WENV170086875
CEAC01024479
153692
Bacteroidota
GTA
Tyr
>WENV170087370
CEAC01041220
30277
Bacteroidota
GGA
Ser
>WENV170086472
CEAC01009722
467914
Bacteroidota
GCC
Gly
>WENV170086473
CEAC01009722
467914
Bacteroidota
GCC
Gly
>WENV170086725
CEAC01019879
653377
Bacteroidota
CTC
Glu
>WENV170086357
CEAC01005975
653350
Bacteroidota
GCA
Cys
>WENV170086429
CEAC01008085
653350
Bacteroidota
GCA
Cys
>WENV170086430
CEAC01008085
653350
Bacteroidota
GCA
Cys
>WENV170086447
CEAC01008712
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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