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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170100548
CEAQ01017961
284706
Bacteroidota
GTT
Asn
>WENV170100549
CEAQ01017961
284706
Bacteroidota
GTT
Asn
>WENV170100550
CEAQ01017961
284706
Bacteroidota
GTT
Asn
>WENV170100551
CEAQ01017961
284706
Bacteroidota
GTT
Asn
>WENV170100047
CEAQ01000723
86857
Bacteroidota
TAA
Leu
>WENV170100310
CEAQ01009284
86857
Bacteroidota
TAA
Leu
>WENV170100612
CEAQ01020338
270542
Bacteroidota
CAT
Met
>WENV170100370
CEAQ01011516
270412
Bacteroidota
GTT
Asn
>WENV170100371
CEAQ01011516
270412
Bacteroidota
GTT
Asn
>WENV170100372
CEAQ01011516
270412
Bacteroidota
GTT
Asn
>WENV170100105
CEAQ01002097
451354
Bacteroidota
TTT
Lys
>WENV170100140
CEAQ01003506
451354
Bacteroidota
TTT
Lys
>WENV170100053
CEAQ01000901
654770
Bacteroidota
GGT
Thr
>WENV170100260
CEAQ01007520
113533
Bacteroidota
CAG
Leu
>WENV170100462
CEAQ01014465
281835
Bacteroidota
TGT
Thr
>WENV170100301
CEAQ01009247
779388
Bacteroidota
CTG
Gln
>WENV170100302
CEAQ01009247
779388
Bacteroidota
CTG
Gln
>WENV170100224
CEAQ01006529
451478
Bacteroidota
TTT
Lys
>WENV170100050
CEAQ01000901
658239
Bacteroidota
CTC
Glu
>WENV170100135
CEAQ01003308
87355
Bacteroidota
TGA
Ser
>WENV170100176
CEAQ01004661
87355
Bacteroidota
TGA
Ser
>WENV170100192
CEAQ01005159
87355
Bacteroidota
TGA
Ser
>WENV170100418
CEAQ01012660
87355
Bacteroidota
TGA
Ser
>WENV170100647
CEAQ01021626
30278
Bacteroidota
GGA
Ser
>WENV170100396
CEAQ01012162
112241
Bacteroidota
CAA
Leu
>WENV170100273
CEAQ01008123
218000
Bacteroidota
CAG
Leu
>WENV170100485
CEAQ01015441
270492
Bacteroidota
GTG
His
>WENV170100509
CEAQ01016244
451360
Bacteroidota
CGT
Thr
>WENV170100172
CEAQ01004399
458644
Bacteroidota
CCC
Gly
>WENV170100118
CEAQ01002748
153684
Bacteroidota
GTA
Tyr
>WENV170100263
CEAQ01007688
153684
Bacteroidota
GTA
Tyr
>WENV170100358
CEAQ01011138
153684
Bacteroidota
GTA
Tyr
>WENV170100469
CEAQ01014754
153684
Bacteroidota
GTA
Tyr
>WENV170100595
CEAQ01019752
153684
Bacteroidota
GTA
Tyr
>WENV170100046
CEAQ01000717
783463
Bacteroidota
CTG
Gln
>WENV170100133
CEAQ01003305
273124
Bacteroidota
GTC
Asp
>WENV170100586
CEAQ01019475
180313
Bacteroidota
TAG
Leu
>WENV170100169
CEAQ01004344
86859
Bacteroidota
TGA
Ser
>WENV170100429
CEAQ01013170
270514
Bacteroidota
GTT
Asn
>WENV170100645
CEAQ01021564
270514
Bacteroidota
GTT
Asn
>WENV170100356
CEAQ01011136
451389
Bacteroidota
GCC
Gly
>WENV170100456
CEAQ01014295
451389
Bacteroidota
GCC
Gly
>WENV170100642
CEAQ01021407
451389
Bacteroidota
GCC
Gly
>WENV170100426
CEAQ01013053
179905
Bacteroidota
TAG
Leu
>WENV170100131
CEAQ01003297
270418
Bacteroidota
GGC
Ala
>WENV170100579
CEAQ01019310
270418
Bacteroidota
GGC
Ala
>WENV170100521
CEAQ01016633
451431
Bacteroidota
CCA
Trp
>WENV170100505
CEAQ01016145
277204
Bacteroidota
GTC
Asp
>WENV170100506
CEAQ01016145
277204
Bacteroidota
GTC
Asp
>WENV170100041
CEAQ01000435
240600
Bacteroidota
GGG
Pro
>WENV170100217
CEAQ01006365
240600
Bacteroidota
GGG
Pro
>WENV170100514
CEAQ01016461
240600
Bacteroidota
GGG
Pro
>WENV170100351
CEAQ01011126
779393
Bacteroidota
TTG
Gln
>WENV170100355
CEAQ01011135
779393
Bacteroidota
TTG
Gln
>WENV170100532
CEAQ01017068
779393
Bacteroidota
TTG
Gln
>WENV170100576
CEAQ01019247
779393
Bacteroidota
TTG
Gln
>WENV170100222
CEAQ01006525
279189
Bacteroidota
GTT
Asn
>WENV170100223
CEAQ01006525
279189
Bacteroidota
GTT
Asn
>WENV170100402
CEAQ01012170
270494
Bacteroidota
CGG
Pro
>WENV170100474
CEAQ01014930
782347
Bacteroidota
CTG
Gln
>WENV170100461
CEAQ01014465
270471
Bacteroidota
GGC
Ala
>WENV170100125
CEAQ01002972
270491
Bacteroidota
GGC
Ala
>WENV170100161
CEAQ01003742
270491
Bacteroidota
GGC
Ala
>WENV170100212
CEAQ01006163
270491
Bacteroidota
GGC
Ala
>WENV170100605
CEAQ01020145
270491
Bacteroidota
GGC
Ala
>WENV170100116
CEAQ01002638
451484
Bacteroidota
CAT
Met
>WENV170100498
CEAQ01015989
653343
Bacteroidota
CCT
Arg
>WENV170100204
CEAQ01006011
30567
Bacteroidota
GGA
Ser
>WENV170100585
CEAQ01019474
30567
Bacteroidota
GGA
Ser
>WENV170100336
CEAQ01010574
466831
Bacteroidota
GCC
Gly
>WENV170100615
CEAQ01020522
653388
Bacteroidota
TTC
Glu
>WENV170100616
CEAQ01020522
653388
Bacteroidota
TTC
Glu
>WENV170100290
CEAQ01008453
463028
Bacteroidota
CAT
Met
>WENV170100318
CEAQ01009593
463028
Bacteroidota
CAT
Met
>WENV170100401
CEAQ01012164
653774
Bacteroidota
CAT
Met
>WENV170100439
CEAQ01013608
653774
Bacteroidota
CAT
Met
>WENV170100470
CEAQ01014755
653774
Bacteroidota
CAT
Met
>WENV170100052
CEAQ01000901
153692
Bacteroidota
GTA
Tyr
>WENV170100064
CEAQ01001113
153692
Bacteroidota
GTA
Tyr
>WENV170100566
CEAQ01018762
153692
Bacteroidota
GTA
Tyr
>WENV170100340
CEAQ01010708
270851
Bacteroidota
TCT
Arg
>WENV170100558
CEAQ01018377
270851
Bacteroidota
TCT
Arg
>WENV170100628
CEAQ01021095
30277
Bacteroidota
GGA
Ser
>WENV170100326
CEAQ01010064
467914
Bacteroidota
GCC
Gly
>WENV170100327
CEAQ01010064
467914
Bacteroidota
GCC
Gly
>WENV170100517
CEAQ01016633
467914
Bacteroidota
GCC
Gly
>WENV170100056
CEAQ01000944
653377
Bacteroidota
CTC
Glu
>WENV170100481
CEAQ01015303
653377
Bacteroidota
CTC
Glu
>WENV170100168
CEAQ01004059
653350
Bacteroidota
GCA
Cys
>WENV170100303
CEAQ01009247
653350
Bacteroidota
GCA
Cys
>WENV170100493
CEAQ01015631
653350
Bacteroidota
GCA
Cys
>WENV170100582
CEAQ01019468
653350
Bacteroidota
GCA
Cys
>WENV170100403
CEAQ01012170
451452
Bacteroidota
CCA
Trp
>WENV170100066
CEAQ01001113
270497
Bacteroidota
GTG
His
>WENV170100444
CEAQ01013962
270497
Bacteroidota
GTG
His
>WENV170100445
CEAQ01013962
270497
Bacteroidota
GTG
His
>WENV170100443
CEAQ01013855
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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