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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
130 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170102225
CEAX01006829
284706
Bacteroidota
GTT
Asn
>WENV170103263
CEAX01041309
284706
Bacteroidota
GTT
Asn
>WENV170102784
CEAX01025519
154983
Bacteroidota
GTA
Tyr
>WENV170103073
CEAX01035070
154983
Bacteroidota
GTA
Tyr
>WENV170103587
CEAX01052845
154983
Bacteroidota
GTA
Tyr
>WENV170102606
CEAX01019960
86857
Bacteroidota
TAA
Leu
>WENV170102326
CEAX01010933
779477
Bacteroidota
TTG
Gln
>WENV170102120
CEAX01002916
281406
Bacteroidota
GGC
Ala
>WENV170103497
CEAX01050106
281406
Bacteroidota
GGC
Ala
>WENV170102111
CEAX01002601
270542
Bacteroidota
CAT
Met
>WENV170102601
CEAX01019960
270412
Bacteroidota
GTT
Asn
>WENV170102602
CEAX01019960
270412
Bacteroidota
GTT
Asn
>WENV170102603
CEAX01019960
270412
Bacteroidota
GTT
Asn
>WENV170102736
CEAX01023760
451354
Bacteroidota
TTT
Lys
>WENV170103042
CEAX01033713
451354
Bacteroidota
TTT
Lys
>WENV170102397
CEAX01013447
654770
Bacteroidota
GGT
Thr
>WENV170102853
CEAX01027281
113533
Bacteroidota
CAG
Leu
>WENV170103217
CEAX01039378
779388
Bacteroidota
CTG
Gln
>WENV170103218
CEAX01039378
779388
Bacteroidota
CTG
Gln
>WENV170102414
CEAX01013831
240966
Bacteroidota
TAC
Val
>WENV170102415
CEAX01013831
240966
Bacteroidota
TAC
Val
>WENV170102416
CEAX01013831
240966
Bacteroidota
TAC
Val
>WENV170102193
CEAX01005790
451478
Bacteroidota
TTT
Lys
>WENV170102432
CEAX01014761
451478
Bacteroidota
TTT
Lys
>WENV170102516
CEAX01017508
451478
Bacteroidota
TTT
Lys
>WENV170103324
CEAX01044403
451478
Bacteroidota
TTT
Lys
>WENV170103128
CEAX01036818
284758
Bacteroidota
GAT
Ile
>WENV170102513
CEAX01017502
653389
Bacteroidota
GGT
Thr
>WENV170102399
CEAX01013447
658239
Bacteroidota
CTC
Glu
>WENV170102124
CEAX01003024
30311
Bacteroidota
GGA
Ser
>WENV170102477
CEAX01016576
30311
Bacteroidota
GGA
Ser
>WENV170103256
CEAX01041291
30311
Bacteroidota
GGA
Ser
>WENV170103570
CEAX01052158
30311
Bacteroidota
GGA
Ser
>WENV170102143
CEAX01003453
779381
Bacteroidota
CTG
Gln
>WENV170103032
CEAX01033060
30278
Bacteroidota
GGA
Ser
>WENV170103055
CEAX01034541
112241
Bacteroidota
CAA
Leu
>WENV170103107
CEAX01035944
112241
Bacteroidota
CAA
Leu
>WENV170103546
CEAX01051521
112241
Bacteroidota
CAA
Leu
>WENV170103149
CEAX01037499
218000
Bacteroidota
CAG
Leu
>WENV170103364
CEAX01045890
218000
Bacteroidota
CAG
Leu
>WENV170103367
CEAX01045890
218000
Bacteroidota
CAG
Leu
>WENV170102411
CEAX01013830
270492
Bacteroidota
GTG
His
>WENV170103386
CEAX01046775
451360
Bacteroidota
CGT
Thr
>WENV170102697
CEAX01022714
458644
Bacteroidota
CCC
Gly
>WENV170103059
CEAX01034601
458644
Bacteroidota
CCC
Gly
>WENV170102096
CEAX01001772
153684
Bacteroidota
GTA
Tyr
>WENV170102608
CEAX01019960
153684
Bacteroidota
GTA
Tyr
>WENV170102732
CEAX01023760
153684
Bacteroidota
GTA
Tyr
>WENV170102283
CEAX01009307
783463
Bacteroidota
CTG
Gln
>WENV170102916
CEAX01029394
783463
Bacteroidota
CTG
Gln
>WENV170103186
CEAX01038863
783463
Bacteroidota
CTG
Gln
>WENV170103187
CEAX01038864
783463
Bacteroidota
CTG
Gln
>WENV170103408
CEAX01047489
783463
Bacteroidota
CTG
Gln
>WENV170102716
CEAX01023301
273124
Bacteroidota
GTC
Asp
>WENV170102466
CEAX01015909
180313
Bacteroidota
TAG
Leu
>WENV170102618
CEAX01020116
180313
Bacteroidota
TAG
Leu
>WENV170102155
CEAX01003939
86859
Bacteroidota
TGA
Ser
>WENV170102410
CEAX01013830
86859
Bacteroidota
TGA
Ser
>WENV170102660
CEAX01021842
86859
Bacteroidota
TGA
Ser
>WENV170102734
CEAX01023760
86859
Bacteroidota
TGA
Ser
>WENV170102787
CEAX01025520
86859
Bacteroidota
TGA
Ser
>WENV170102247
CEAX01007809
270514
Bacteroidota
GTT
Asn
>WENV170102420
CEAX01014130
270514
Bacteroidota
GTT
Asn
>WENV170102740
CEAX01023764
270514
Bacteroidota
GTT
Asn
>WENV170102741
CEAX01023764
270514
Bacteroidota
GTT
Asn
>WENV170103271
CEAX01041821
270514
Bacteroidota
GTT
Asn
>WENV170103273
CEAX01041821
270514
Bacteroidota
GTT
Asn
>WENV170102586
CEAX01019454
451389
Bacteroidota
GCC
Gly
>WENV170103268
CEAX01041763
451389
Bacteroidota
GCC
Gly
>WENV170103465
CEAX01048878
451389
Bacteroidota
GCC
Gly
>WENV170103467
CEAX01048878
451389
Bacteroidota
GCC
Gly
>WENV170103583
CEAX01052443
451389
Bacteroidota
GCC
Gly
>WENV170102999
CEAX01031721
179905
Bacteroidota
TAG
Leu
>WENV170102944
CEAX01029883
660446
Bacteroidota
CCT
Arg
>WENV170102069
CEAX01000592
270418
Bacteroidota
GGC
Ala
>WENV170102384
CEAX01013060
270418
Bacteroidota
GGC
Ala
>WENV170102942
CEAX01029880
270418
Bacteroidota
GGC
Ala
>WENV170102082
CEAX01001356
277204
Bacteroidota
GTC
Asp
>WENV170103370
CEAX01045892
277204
Bacteroidota
GTC
Asp
>WENV170102434
CEAX01014764
240600
Bacteroidota
GGG
Pro
>WENV170102714
CEAX01023161
240600
Bacteroidota
GGG
Pro
>WENV170103030
CEAX01033060
240600
Bacteroidota
GGG
Pro
>WENV170103449
CEAX01048394
240600
Bacteroidota
GGG
Pro
>WENV170102535
CEAX01018049
779393
Bacteroidota
TTG
Gln
>WENV170102749
CEAX01024269
779393
Bacteroidota
TTG
Gln
>WENV170103139
CEAX01036972
779393
Bacteroidota
TTG
Gln
>WENV170103351
CEAX01045845
779393
Bacteroidota
TTG
Gln
>WENV170102856
CEAX01027281
270494
Bacteroidota
CGG
Pro
>WENV170103233
CEAX01040478
270494
Bacteroidota
CGG
Pro
>WENV170103031
CEAX01033060
782347
Bacteroidota
CTG
Gln
>WENV170103008
CEAX01032194
270471
Bacteroidota
GGC
Ala
>WENV170103179
CEAX01038414
270491
Bacteroidota
GGC
Ala
>WENV170102614
CEAX01019963
451484
Bacteroidota
CAT
Met
>WENV170102604
CEAX01019960
653343
Bacteroidota
CCT
Arg
>WENV170103062
CEAX01034775
30567
Bacteroidota
GGA
Ser
>WENV170103388
CEAX01046819
30567
Bacteroidota
GGA
Ser
>WENV170102401
CEAX01013450
30567
Bacteroidota
GGA
Ser
>WENV170102573
CEAX01018958
30567
Bacteroidota
GGA
Ser
>WENV170102788
CEAX01025547
466831
Bacteroidota
GCC
Gly
>WENV170103013
CEAX01032204
466831
Bacteroidota
GCC
Gly
>WENV170102945
CEAX01029883
653388
Bacteroidota
TTC
Glu
>WENV170102946
CEAX01029883
653388
Bacteroidota
TTC
Glu
>WENV170102200
CEAX01005800
463028
Bacteroidota
CAT
Met
>WENV170102212
CEAX01006321
463028
Bacteroidota
CAT
Met
>WENV170102884
CEAX01028516
463028
Bacteroidota
CAT
Met
>WENV170103300
CEAX01043166
463028
Bacteroidota
CAT
Met
>WENV170102571
CEAX01018947
653774
Bacteroidota
CAT
Met
>WENV170103442
CEAX01048378
653774
Bacteroidota
CAT
Met
>WENV170103538
CEAX01050977
653774
Bacteroidota
CAT
Met
>WENV170102245
CEAX01007656
153692
Bacteroidota
GTA
Tyr
>WENV170102396
CEAX01013447
153692
Bacteroidota
GTA
Tyr
>WENV170102770
CEAX01024735
153692
Bacteroidota
GTA
Tyr
>WENV170102926
CEAX01029572
153692
Bacteroidota
GTA
Tyr
>WENV170102289
CEAX01009310
270851
Bacteroidota
TCT
Arg
>WENV170103310
CEAX01043974
180504
Bacteroidota
CAA
Leu
>WENV170102934
CEAX01029873
467914
Bacteroidota
GCC
Gly
>WENV170102935
CEAX01029873
467914
Bacteroidota
GCC
Gly
>WENV170102616
CEAX01019972
653377
Bacteroidota
CTC
Glu
>WENV170102911
CEAX01029043
653377
Bacteroidota
CTC
Glu
>WENV170102061
CEAX01000292
653350
Bacteroidota
GCA
Cys
>WENV170102625
CEAX01020394
653350
Bacteroidota
GCA
Cys
>WENV170102729
CEAX01023760
653350
Bacteroidota
GCA
Cys
>WENV170102799
CEAX01025956
653350
Bacteroidota
GCA
Cys
>WENV170103068
CEAX01035059
653350
Bacteroidota
GCA
Cys
>WENV170102462
CEAX01015906
463502
Bacteroidota
CTT
Lys
>WENV170102857
CEAX01027281
451452
Bacteroidota
CCA
Trp
>WENV170102270
CEAX01008509
270497
Bacteroidota
GTG
His
>WENV170102271
CEAX01008509
270497
Bacteroidota
GTG
His
>WENV170102371
CEAX01012383
270497
Bacteroidota
GTG
His
>WENV170103476
CEAX01049279
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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