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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
121 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170107343
CEBY01037775
154983
Bacteroidota
GTA
Tyr
>WENV170106998
CEBY01024620
86857
Bacteroidota
TAA
Leu
>WENV170107150
CEBY01030908
281406
Bacteroidota
GGC
Ala
>WENV170107654
CEBY01052218
270542
Bacteroidota
CAT
Met
>WENV170107818
CEBY01060549
270542
Bacteroidota
CAT
Met
>WENV170107919
CEBY01065158
270412
Bacteroidota
GTT
Asn
>WENV170107920
CEBY01065158
270412
Bacteroidota
GTT
Asn
>WENV170107921
CEBY01065158
270412
Bacteroidota
GTT
Asn
>WENV170106839
CEBY01017051
451354
Bacteroidota
TTT
Lys
>WENV170106847
CEBY01017052
451354
Bacteroidota
TTT
Lys
>WENV170107651
CEBY01052164
451354
Bacteroidota
TTT
Lys
>WENV170107880
CEBY01063408
654770
Bacteroidota
GGT
Thr
>WENV170106710
CEBY01010908
113533
Bacteroidota
CAG
Leu
>WENV170106972
CEBY01023713
113533
Bacteroidota
CAG
Leu
>WENV170107084
CEBY01029134
113533
Bacteroidota
CAG
Leu
>WENV170107862
CEBY01062630
113533
Bacteroidota
CAG
Leu
>WENV170106685
CEBY01008928
779388
Bacteroidota
CTG
Gln
>WENV170107553
CEBY01047359
779388
Bacteroidota
CTG
Gln
>WENV170106509
CEBY01001584
240966
Bacteroidota
TAC
Val
>WENV170106978
CEBY01024139
451478
Bacteroidota
TTT
Lys
>WENV170107065
CEBY01028291
451478
Bacteroidota
TTT
Lys
>WENV170107249
CEBY01035225
451478
Bacteroidota
TTT
Lys
>WENV170107396
CEBY01040180
451478
Bacteroidota
TTT
Lys
>WENV170106744
CEBY01012461
658239
Bacteroidota
CTC
Glu
>WENV170107041
CEBY01026629
30311
Bacteroidota
GGA
Ser
>WENV170106652
CEBY01007772
87355
Bacteroidota
TGA
Ser
>WENV170106653
CEBY01007772
87355
Bacteroidota
TGA
Ser
>WENV170106905
CEBY01020232
779381
Bacteroidota
CTG
Gln
>WENV170107492
CEBY01044084
30278
Bacteroidota
GGA
Ser
>WENV170107137
CEBY01030353
218000
Bacteroidota
CAG
Leu
>WENV170107394
CEBY01040176
218000
Bacteroidota
CAG
Leu
>WENV170107875
CEBY01063055
218000
Bacteroidota
CAG
Leu
>WENV170107901
CEBY01064360
218000
Bacteroidota
CAG
Leu
>WENV170107904
CEBY01064360
218000
Bacteroidota
CAG
Leu
>WENV170107906
CEBY01064360
218000
Bacteroidota
CAG
Leu
>WENV170106623
CEBY01006288
270492
Bacteroidota
GTG
His
>WENV170107729
CEBY01055343
451360
Bacteroidota
CGT
Thr
>WENV170107804
CEBY01059507
451360
Bacteroidota
CGT
Thr
>WENV170107264
CEBY01035707
451360
Bacteroidota
CGT
Thr
>WENV170107529
CEBY01046136
458644
Bacteroidota
CCC
Gly
>WENV170107716
CEBY01054853
458644
Bacteroidota
CCC
Gly
>WENV170107725
CEBY01055306
153684
Bacteroidota
GTA
Tyr
>WENV170107764
CEBY01056925
153684
Bacteroidota
GTA
Tyr
>WENV170107918
CEBY01065158
153684
Bacteroidota
GTA
Tyr
>WENV170106917
CEBY01021059
783463
Bacteroidota
CTG
Gln
>WENV170107196
CEBY01032410
783463
Bacteroidota
CTG
Gln
>WENV170107331
CEBY01037263
783463
Bacteroidota
CTG
Gln
>WENV170107005
CEBY01025605
273124
Bacteroidota
GTC
Asp
>WENV170106965
CEBY01023646
180313
Bacteroidota
TAG
Leu
>WENV170107783
CEBY01058067
180313
Bacteroidota
TAG
Leu
>WENV170106626
CEBY01006294
86859
Bacteroidota
TGA
Ser
>WENV170106932
CEBY01021785
86859
Bacteroidota
TGA
Ser
>WENV170107323
CEBY01037254
86859
Bacteroidota
TGA
Ser
>WENV170107372
CEBY01039202
86859
Bacteroidota
TGA
Ser
>WENV170107376
CEBY01039226
86859
Bacteroidota
TGA
Ser
>WENV170107573
CEBY01048391
86859
Bacteroidota
TGA
Ser
>WENV170106542
CEBY01003073
270514
Bacteroidota
GTT
Asn
>WENV170107504
CEBY01045126
270514
Bacteroidota
GTT
Asn
>WENV170106671
CEBY01008350
451389
Bacteroidota
GCC
Gly
>WENV170106673
CEBY01008350
451389
Bacteroidota
GCC
Gly
>WENV170107083
CEBY01029134
451389
Bacteroidota
GCC
Gly
>WENV170106702
CEBY01009915
179905
Bacteroidota
TAG
Leu
>WENV170107351
CEBY01038055
660446
Bacteroidota
CCT
Arg
>WENV170106578
CEBY01004299
270418
Bacteroidota
GGC
Ala
>WENV170107049
CEBY01027172
270418
Bacteroidota
GGC
Ala
>WENV170107551
CEBY01047358
277204
Bacteroidota
GTC
Asp
>WENV170107362
CEBY01038670
240600
Bacteroidota
GGG
Pro
>WENV170107477
CEBY01043705
240600
Bacteroidota
GGG
Pro
>WENV170107490
CEBY01044084
240600
Bacteroidota
GGG
Pro
>WENV170107710
CEBY01054778
240600
Bacteroidota
GGG
Pro
>WENV170107738
CEBY01055858
240600
Bacteroidota
GGG
Pro
>WENV170106531
CEBY01002608
779393
Bacteroidota
TTG
Gln
>WENV170107478
CEBY01043709
779393
Bacteroidota
TTG
Gln
>WENV170107686
CEBY01053169
779393
Bacteroidota
TTG
Gln
>WENV170107704
CEBY01054384
779393
Bacteroidota
TTG
Gln
>WENV170107821
CEBY01060985
779393
Bacteroidota
TTG
Gln
>WENV170106538
CEBY01002962
270494
Bacteroidota
CGG
Pro
>WENV170107219
CEBY01033500
270494
Bacteroidota
CGG
Pro
>WENV170106906
CEBY01020249
782347
Bacteroidota
CTG
Gln
>WENV170107491
CEBY01044084
782347
Bacteroidota
CTG
Gln
>WENV170107605
CEBY01050210
270471
Bacteroidota
GGC
Ala
>WENV170106493
CEBY01001081
270491
Bacteroidota
GGC
Ala
>WENV170106552
CEBY01003720
451484
Bacteroidota
CAT
Met
>WENV170107775
CEBY01057477
451484
Bacteroidota
CAT
Met
>WENV170107913
CEBY01064928
451484
Bacteroidota
CAT
Met
>WENV170106996
CEBY01024620
653343
Bacteroidota
CCT
Arg
>WENV170107708
CEBY01054449
30567
Bacteroidota
GGA
Ser
>WENV170107778
CEBY01057575
30567
Bacteroidota
GGA
Ser
>WENV170106973
CEBY01023812
653388
Bacteroidota
TTC
Glu
>WENV170106974
CEBY01023812
653388
Bacteroidota
TTC
Glu
>WENV170107352
CEBY01038055
653388
Bacteroidota
TTC
Glu
>WENV170107353
CEBY01038055
653388
Bacteroidota
TTC
Glu
>WENV170106570
CEBY01004290
463028
Bacteroidota
CAT
Met
>WENV170107330
CEBY01037263
463028
Bacteroidota
CAT
Met
>WENV170107761
CEBY01056916
463028
Bacteroidota
CAT
Met
>WENV170106798
CEBY01014443
653774
Bacteroidota
CAT
Met
>WENV170107062
CEBY01027782
653774
Bacteroidota
CAT
Met
>WENV170106472
CEBY01000046
153692
Bacteroidota
GTA
Tyr
>WENV170106491
CEBY01001080
153692
Bacteroidota
GTA
Tyr
>WENV170106960
CEBY01023634
153692
Bacteroidota
GTA
Tyr
>WENV170107879
CEBY01063408
153692
Bacteroidota
GTA
Tyr
>WENV170106832
CEBY01016532
270851
Bacteroidota
TCT
Arg
>WENV170107114
CEBY01029469
270851
Bacteroidota
TCT
Arg
>WENV170107914
CEBY01064939
270851
Bacteroidota
TCT
Arg
>WENV170107746
CEBY01055884
180504
Bacteroidota
CAA
Leu
>WENV170106941
CEBY01022157
467914
Bacteroidota
GCC
Gly
>WENV170106942
CEBY01022157
467914
Bacteroidota
GCC
Gly
>WENV170107384
CEBY01039920
653377
Bacteroidota
CTC
Glu
>WENV170107807
CEBY01059521
653377
Bacteroidota
CTC
Glu
>WENV170106859
CEBY01017584
653350
Bacteroidota
GCA
Cys
>WENV170107222
CEBY01033636
653350
Bacteroidota
GCA
Cys
>WENV170107312
CEBY01036789
653350
Bacteroidota
GCA
Cys
>WENV170107563
CEBY01047729
653350
Bacteroidota
GCA
Cys
>WENV170107596
CEBY01049757
653350
Bacteroidota
GCA
Cys
>WENV170106504
CEBY01001584
463502
Bacteroidota
CTT
Lys
>WENV170106539
CEBY01002962
451452
Bacteroidota
CCA
Trp
>WENV170106961
CEBY01023634
270497
Bacteroidota
GTG
His
>WENV170106962
CEBY01023634
270497
Bacteroidota
GTG
His
>WENV170106963
CEBY01023634
270497
Bacteroidota
GTG
His
>WENV170107480
CEBY01043711
653342
Bacteroidota
CCG
Arg
>WENV170107805
CEBY01059520
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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